New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4477967	13 (0.780)	4 (0.250)	4/272	1.5	24.4%	coding (251/321 nt)	PP_3966	transposase
	?	NC_002947	= 4477991	NA (NA)					coding (227/321 nt)	PP_3966	transposase

ACCCGGGCTAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATGGCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCACTTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCGGCAGCCATTTGCGGATGACGTTGGCATTGATG  >  NC_002947/4477821‑4478116                                                                                                                                                   |                                                                                                                                                      aCCCGGGCTAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATGGCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCACtt                                                                                                                                                    >  1:177153/1‑150 (MQ=32)         tAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATGGCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCACTTGCCCGGcc                                                                                                                                            >  1:138129/1‑150 (MQ=11)                        gCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATGGCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCActtgcccgtggccgggcaagtgatca                                                                                                                             <  1:133940‑M1/150‑27 (MQ=255)                            gcgcgcATGTCCATCGGCTCGGTGGCCAGCCAGATGGCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCActtgcccgtggccgggcaagtgatcacggt                                                                                                                         <  2:117259‑M1/150‑31 (MQ=255)                              gcgcATGTCCATCGGCTCGGTGGCCAGCCAGATGGCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCAtcgagttgcccgtggccgggcaagtgatcacg                                                                                                                       <  2:239652‑M1/150‑33 (MQ=255)                               cgcATGTCCATCGGCTCGGTGGCCAGCCAGATGGCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCAtcgagttgcccgtggccgggcaagtgatcacgg                                                                                                                      <  2:365929‑M1/150‑34 (MQ=255)                                                                                                     ttGCGCACAACCCTCGGGATCCGAGGCTATCCATTTCACCGTGATCACTTGCCCGGCCAAGGTCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGATGGTAGTGAAGCTGCTGCGGGCAg                                                >  2:105708/1‑150 (MQ=11)                                                                                                            caACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCACTTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGa                                         <  1:20841/150‑1 (MQ=32)                                                                                                                    gggATCCGAGGCTGGCCATTTCACCGTGATCACTTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCgg                                 >  1:69505/1‑150 (MQ=32)                                                                                                                         ccGAGGCTGGCCATTTCACCGTGATCACTTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGa                                         <  1:60822/137‑1 (MQ=32)                                                                                                                         ccGAGGCTGGCCATTTCACCGTGATCACTTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGa                                         >  2:60822/1‑137 (MQ=32)                                                                                                                               cTGGCCATTTCACCGTGATCACTTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCGGCAGCCATTTGc                      <  2:267357/150‑1 (MQ=32)                                                                                                                                       ttCACCGTGATCACGTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCGGCAGCCATTTGCGGATGACg              <  1:11653/150‑1 (MQ=17)                                                                                                                                         cACCGTGATCACTTGCCCGGCGACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCGGCAGCCATTTGCGGATGACGtt            <  2:355965/150‑1 (MQ=17)                                                                                                                                         cACCGTGATCACTTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCGGCAGCCATTTGCGGATGACGtt            <  2:355979/150‑1 (MQ=32)                                                                                                                                                 tcatcgagttgcccgtggccgggcaagtgatcacggtgaaatggccagcctcggatcccgagggttgtgcgcaatttattcgggctttcgctcaatgatccgcatcgatgccatctggctggccaccgagccgatggacatgcgcgctgg    >  1:184612‑M1/1‑3 (MQ=255)                                                                                                                                                 tCACTTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCGGCAGCCATTTGCGGATGACGTTGGCATTGa    <  2:177153/150‑1 (MQ=32)                                                                                                                                                  catcgagttgcccgtggccgggcaagtgatcacggtgaaatggccagcctcggatcccgagggttgtgcgcaatttattcgggctttcgctcaatgatccgcatcgatgccatctggctggccaccgagccgatggacatgcgcgctggc   <  2:290131‑M1/150‑149 (MQ=255)                                                                                                                                                  cACTTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCGGCAGCCATTTGCGGATGACGTTGGCATTGAt   <  2:223052/150‑1 (MQ=32)                                                                                                                                                   atcgagttgcccgtggccgggcaagtgatcacggtgaaatggccagcctcggatcccgagggttgtgcgcaatttattcgggctttcgctcaatgatccgcatcgatgccatctggctggccaccgagccgatggacatgcgcgctggca  >  1:321212‑M1/1‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                      ACCCGGGCTAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATGGCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCACTTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCGGCAGCCATTTGCGGATGACGTTGGCATTGATG  >  NC_002947/4477821‑4478116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.