New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4477967	13 (0.780)	4 (0.250)	4/272	1.5	24.4%	coding (251/321 nt)	PP_3966	transposase
	?	NC_002947	= 4477991	NA (NA)					coding (227/321 nt)	PP_3966	transposase

TTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCACTTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCGGCAGCCATTTGCGGATGACGTTGGCATTGATGCCGTGGTTGATGGCGACACT  >  NC_002947/4477921‑4478136                                                                       |                                                                                                                                                  ttGCGCACAACCCTCGGGATCCGAGGCTATCCATTTCACCGTGATCACTTGCCCGGCCAAGGTCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGATGGTAGTGAAGCTGCTGCGGGCAg                                                                    >  2:105708/1‑150 (MQ=11)        caACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCACTTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGa                                                             <  1:20841/150‑1 (MQ=32)                gggATCCGAGGCTGGCCATTTCACCGTGATCACTTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCgg                                                     >  1:69505/1‑150 (MQ=32)                     ccGAGGCTGGCCATTTCACCGTGATCACTTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGa                                                             <  1:60822/137‑1 (MQ=32)                     ccGAGGCTGGCCATTTCACCGTGATCACTTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGa                                                             >  2:60822/1‑137 (MQ=32)                           cTGGCCATTTCACCGTGATCACTTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCGGCAGCCATTTGc                                          <  2:267357/150‑1 (MQ=32)                                   ttCACCGTGATCACGTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCGGCAGCCATTTGCGGATGACg                                  <  1:11653/150‑1 (MQ=17)                                     cACCGTGATCACTTGCCCGGCGACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCGGCAGCCATTTGCGGATGACGtt                                <  2:355965/150‑1 (MQ=17)                                     cACCGTGATCACTTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCGGCAGCCATTTGCGGATGACGtt                                <  2:355979/150‑1 (MQ=32)                                             tCACTTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCGGCAGCCATTTGCGGATGACGTTGGCATTGa                        <  2:177153/150‑1 (MQ=32)                                              cACTTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCGGCAGCCATTTGCGGATGACGTTGGCATTGAt                       <  2:223052/150‑1 (MQ=32)                                                     ccGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCGGCAGCCATTTGCGGATGACGTTGGCATTGATGCCGTgg                >  1:136910/1‑150 (MQ=32)                                                     ccGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCGGCAGCCATTTGCGGATGACGTTGGCATTGATGCCGTgg                <  2:370044/150‑1 (MQ=32)                                                      cGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCGGCAGCCATTTGCGGATGACGTTGGCATTGATGCCGTGGt               >  2:31492/1‑150 (MQ=32)                                                                   cTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCGGCAGCCATTTGCGGATGACGTTGGCATTGATGCCGTGGTTGATGGCGACACt  >  2:336936/1‑150 (MQ=32)                                                                       |                                                                                                                                                  TTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCACTTGCCCGGCCACGGGCAACTCGATGATCACTGACGCTTCGACTGGCCGTTTAGGTGCGGCTTTTAGCGGGACGAAAGCTGGTAGTGAAGCCGCTGCGGGCAGATCTCGATAGAGCGGCAGCCATTTGCGGATGACGTTGGCATTGATGCCGTGGTTGATGGCGACACT  >  NC_002947/4477921‑4478136

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.