New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	274147 =	5 (0.300)	3 (0.180)	3/282	1.9	37.7%	coding (423/801 nt)	PP_0221	methionine ABC transporter substrate‑binding protein
	?	NC_002947	274172 =	5 (0.300)					coding (398/801 nt)	PP_0221	methionine ABC transporter substrate‑binding protein

CGTACCAGTTGCACCGCCTCGACCTGAAGGATCTTCAGCTTTTTAGGGTTGGCGAGGATGTCAGCCTCGGTGGCCTTGTAGCCCACGCCGGGCTTGAGGGTGATCAACCCGGCCTTGGCCAGCAGCAGCAGGCCACGGCCGCTGTTGATCGGGTCGTTGGCGATGGCCACGCTGGCGCCTTCAGGCAGCTCGGCAAAGCTTTTGTACTTTTTCGAGTACAGGCCAACGTTGTTGATGATGCCCGGGGCGTAAGGCACAAGGTTGAAGCCTGCAGCAGCCTTGGCGTTTTCCAGGAA  >  NC_002947/274025‑274320                                                                                                                                                    |                                                                                                                                                     ggcttcaaccttgtgccttacgccccgggcatcatcaacaacgttggcctgtactcgaaaaagtacaaaagctttgccgagctgcctgaaggcgccagcgtggccatcgccaacgacccgatCAGCAGCAGGCCACGGCCGCTGTTGATc                                                                                                                                                    >  2:141983‑M1/123‑150 (MQ=255)                                                       aGGATGTCAGCCTCGGTGGCCTTGTAGCCCACGCCGGGCTTGAGGGTGATCAACCCGGCCTTGGCCAGCAGCAGCAGGCCACGGCCGCTGTTGATCGGGTCGTTGGCGATGGCCACGCTGGCGCCTTCAGGCAGCTCGGCAAAGCTTTTg                                                                                              <  1:172663/150‑1 (MQ=255)                                                              cAGCCTCGGTGGCCTTGTAGCCCACGCCGGGCTTGAGGGTGATCAACCCGGCCTTGGCCAGCAGCAGCAGGCCACGGCCGCTGTTGATCGGGTCGTTGGCGATGGCCACGCTGGCGCCTTCAGGCAGCTCGGCAAAGCTTTTGTACtttt                                                                                       >  2:128013/1‑150 (MQ=255)                                                                   aaaagctttgccgagctgcctgaaggcgccagcgtggccatcgccaacgacccgatCAGCAGCAGGCCACGGCCGCTGTTGAt                                                                                                                                                     <  1:46102‑M1/27‑1 (MQ=255)                                                                   aaaagctttgccgagctgcctgaaggcgccagcgtggccatcgccaacgacccgatCAGCAGCAGGCCACGGCCGCTGTTGAt                                                                                                                                                     >  2:46102‑M1/57‑83 (MQ=255)                                                                                                                        gatcaacagcggccgtggcctgctgctgATCGGGTCGTTGGCGATGGCCACGCTGGCGCCTTCAGGCAGCTCGGCAAAGCTTTTGTACTTTTTCGAGTACAGGCCAACGTTGTTGATGATGCCCGGGGCGTAAGGCACAAGGTTGAAGcc                             >  2:141983‑M2/29‑150 (MQ=255)                                                                                                                         atcaacagcggccgtggcctgctgctgATCGGGTCGTTGGCGATGGCCACGCTGGCGCCTTCAGGCAGCTCGGCAAAGCtttt                                                                                               <  1:46102‑M2/56‑1 (MQ=255)                                                                                                                         atcaacagcggccgtggcctgctgctgATCGGGTCGTTGGCGATGGCCACGCTGGCGCCTTCAGGCAGCTCGGCAAAGCtttt                                                                                               >  2:46102‑M2/28‑83 (MQ=255)                                                                                                                                       aCGGCCGCTGTTGATCGGGTCGTTGGCGATGGCCACGCTGGCGCCTTCAGGCAGCTCGGCAAAGCTTTTGTACTTTTTCGAGTACAGGCCAACGTTGTTGATGATGCCCGGGGCGTAAGGCACAAGGTTGAAGCCTGCAGCAGCCTTGGc              >  1:232421/1‑150 (MQ=255)                                                                                                                                            cGCTGTTGATCGGGTCGTTGGCGATGGCCACGCTGGCGCCTTCAGGCAGCTCGGCAAAGCTTTTGTACTTTTTCGAGTACAGGCCAACGTTGTTGATGATGCCCGGGGCGTAAGGCACaa                                       <  1:257469/120‑1 (MQ=255)                                                                                                                                            cGCTGTTGATCGGGTCGTTGGCGATGGCCACGCTGGCGCCTTCAGGCAGCTCGGCAAAGCTTTTGTACTTTTTCGAGTACAGGCCAACGTTGTTGATGATGCCCGGGGCGTAAGGCACaa                                       >  2:257469/1‑120 (MQ=255)                                                                                                                                                   gATCGGGTCGTTGGCGATGGCCACGCTGGCGCCTTCAGGCAGCTCGGCAAAGCTTTTGTACTTTTTCGAGTACAGGCCAACGTTGTTGATGATGCCCGGGGCGTAAGGCACAAGGTTGAAGCCTGCAGCAGCCTTGGCGTTTTCCAGGaa  >  2:146369‑M2/2‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CGTACCAGTTGCACCGCCTCGACCTGAAGGATCTTCAGCTTTTTAGGGTTGGCGAGGATGTCAGCCTCGGTGGCCTTGTAGCCCACGCCGGGCTTGAGGGTGATCAACCCGGCCTTGGCCAGCAGCAGCAGGCCACGGCCGCTGTTGATCGGGTCGTTGGCGATGGCCACGCTGGCGCCTTCAGGCAGCTCGGCAAAGCTTTTGTACTTTTTCGAGTACAGGCCAACGTTGTTGATGATGCCCGGGGCGTAAGGCACAAGGTTGAAGCCTGCAGCAGCCTTGGCGTTTTCCAGGAA  >  NC_002947/274025‑274320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.