| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 695669 | 12 (0.720) | 4 (0.250) | 4/270 | 1.5 | 27.3% | coding (87/1494 nt) | mmsA‑I | methylmalonate‑semialdehyde dehydrogenase |
| ? | NC_002947 | = 695687 | 10 (0.640) | coding (105/1494 nt) | mmsA‑I | methylmalonate‑semialdehyde dehydrogenase | |||||
CGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACTGGCCAGGCCGTTCGCAAGGTCGAACTGGCCAGCCGCGCAACCGTGCAGGAAGCGATCGACTCGGCCAAGGCAGCCTTCCCGGCCTGGCGCAACACCCCTCCGGCCAAGCGCGCCCAGGTGATGTTCCGCTTCAAGCAACTGCTGGAGCAGAACGAAGCCAAGATTTCG > NC_002947/695549‑695831 | cgcCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACTGGCCAGGCCGTTCGCAAGGTCGAACTGGCCAGCcg < 2:165878/150‑1 (MQ=255) ccTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACTGGCCAGGCCGTTCGCAAGGTCGAACTGGCCAGCcgcg < 1:337512/150‑1 (MQ=255) cTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACTGGCCAGGCCGTTCGCAAGGTCGAACTGGCCAGCCGCGCAACCGTGCa > 1:92297/1‑150 (MQ=255) gAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACTGGCCAGGCCGTTCGCAAGGTCGAACTGGCCAGCCGCGCAACCGTGCAGGAAGCGATCGACTCGGCCAAGGc > 1:324816/1‑150 (MQ=255) aGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACTGGCCAGGCCGTTCGCAAGGTCGAACTGGCCAGCCGCGCAACCGTGCAGGAAGCGATCGACTCGGCCAAGGCa < 1:280286/150‑1 (MQ=255) aCCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACTGGCCAGGCCGTTCGCAAGGTCGAACTGGCCAGCCGCGCAACCGTGCAGGAAGCGATCGACTCGGCCAAGGCAGCCTTCCCGGCCt < 1:241716/150‑1 (MQ=255) gcACCGCCGATGTCTTCAACCCGTCCACTGGCCAGGCCGTTCGCAAGGTCGAACTGGCCAGCCGCGCAACCGTGCAGGAAGCGATCGACTCGGCCAAGGCAGCCTTCCCGGCCTGGCGCAACACCCCTCCGGCCAAGCGCGCCCAGGTGa > 1:336583/1‑150 (MQ=255) cTTCAACCCGTCCACTGGCCAGGCCGTTCGCAAGGTCGAActggccagtggacgggttgaagacatcggcggtgcgctcacccttggtaaccagttcgccgtga < 1:187541‑M2/104‑65 (MQ=255) cTTCAACCCGTCCACTGGCCAGGCCGTTCGCAAGGTCGAActggccagtggacgggttgaagacatcggcggtgcgctcacccttggtaaccagttcgccgtga > 2:187541‑M2/1‑40 (MQ=255) ccGTCCACTGGCCAGGCCGTTCGCAAGGTCGAActggccagtggacgggttgaagacatcggcggtgcgctcacccttggtaaccagttcgccgtgaatcaggtgctgaacaatgctcatgcaaaactccagataaacaaaggagagcca < 2:306877‑M2/150‑118 (MQ=255) cTGGCCAGGCCGTTCGCAAGGTCGAActggccagtggacgggttgaagacatcggcggtgcgctcacccttggtaaccagttcgccgtgaatcaggtgctgaacaatgctcatgcaaaactccagataaacaaaggagagccaggcgcgc < 2:7948‑M2/150‑125 (MQ=255) gCCAGGCCGTTCGCAAGGTCGAACTGGCCAGCCGCGCAACCGTGCAGGAAGCGATCGACTCGGCCAAGGCAGCCTTCCCGGCCTGGCGCAACACCCCTCCGGCCAAGCGCGCCCAGGTGATGTTCCGCTTCAAGCAACTGCTGGAGCAGa > 1:139676/1‑150 (MQ=255) cAAGGTCGAACTGGCCAGCCGCGCAACCGTGCAGGAAGCGATCGACTCGGCCAAGGCAGCCTTCCCGGCCTGGCGCAACACCCCTCCGGCCAAGCGCGCCCAGGTGATGTTCCGCTTCAAGCAACTGCTGGAGCAGAACGAAGCCAAGAt > 1:21786/1‑150 (MQ=255) gTCGAACTGGCCAGCCGCGCAACCGTGCAGGAAGCGATCGACTCGGCCAAGGCAGCCTTCCCGGCCTGGCGCAACACCCCTCCGGCCAAGCGCGCCCAGGTGATGTTCCGCTTCAAGCAACTGCTGGAGCAGAACGAAGCCAAGATTTCg > 1:69820/1‑150 (MQ=255) | CGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACTGGCCAGGCCGTTCGCAAGGTCGAACTGGCCAGCCGCGCAACCGTGCAGGAAGCGATCGACTCGGCCAAGGCAGCCTTCCCGGCCTGGCGCAACACCCCTCCGGCCAAGCGCGCCCAGGTGATGTTCCGCTTCAAGCAACTGCTGGAGCAGAACGAAGCCAAGATTTCG > NC_002947/695549‑695831 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |