New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2052560	11 (0.660)	5 (0.400)	3/212	1.4	33.2%	intergenic (‑88/+87)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
	?	NC_002947	= 2052596	12 (0.970)					intergenic (‑124/+51)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein

TGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGCCAGAAACGCAC  >  NC_002947/2052507‑2052733                                                                                          |                                                                                                                                          gggggggggGTGGCCCGCCTGGGGGGGCCTCTGCGGGGGTCACCCCGCCCCTCGGGGTTTGTCACCGAGCCCGACGCGGGGGGGGTGCTTGTTGGTGGGGTTACCCCCGCTAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGc                                                                               <  2:82453/147‑1 (MQ=255)          gtgtGCAGCCTGTGCGGGCCTCTTCGCGGGTGTAACCCCTCCAACGGGGAGGTAAAACAGCCCCAAGACGGCCGGGTGCCGGTGGGGGCGGGGTAAACCCCGAAGAGGCCCCCACACGTTACGCAAAACAAACAATACTGcttggtgatc                                                                      >  2:367402/1‑143 (MQ=255)                                        tGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTcccgcccg                                        >  1:75481/1‑150 (MQ=255)                                            cccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacgat                                    <  2:352013‑M2/150‑104 (MQ=255)                                            cccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctg                                                                                                   >  2:39375‑M2/1‑47 (MQ=255)                                            cccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctg                                                                                                   <  1:39375‑M2/87‑41 (MQ=255)                                             ccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCgcggcg                                   >  2:135529/1‑150 (MQ=255)                                               gCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacgatttt                                 <  1:325103‑M2/150‑107 (MQ=255)                                               gCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacgatttt                                 <  1:131367‑M2/150‑107 (MQ=255)                                                 tCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAg                               >  1:116289/1‑150 (MQ=255)                                                   cTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGctt                                                                             <  2:14495/102‑1 (MQ=255)                                                   cTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGctt                                                                             >  1:14495/1‑102 (MQ=255)                                                     aCGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGa                           <  2:75481/150‑1 (MQ=255)                                                        ggtaTGTCAGGGAGCCCTAAGACGGGGGGGTGCCTGTAGGAGGGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCgggagc                        <  2:269190/147‑5 (MQ=255)                                                                acaGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTccc                                             <  1:6409/121‑1 (MQ=255)                                                                acaGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTccc                                             >  2:6409/1‑121 (MQ=255)                                                                              cggcggGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGCCAGAAacgcac  >  1:222478/1‑150 (MQ=255)                                                                                          |                                                                                                                                          TGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGCCAGAAACGCAC  >  NC_002947/2052507‑2052733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.