| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_002947 | 3,823,860 | Δ9 bp | coding (1281‑1289/1293 nt) | kguT ← | 2‑ketogluconate transporter, putative |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947 | 3823860 | 3823868 | 9 | 19 [0] | [0] 18 | kguT | 2‑ketogluconate transporter, putative |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3823859 | 0 (0.000) | 18 (0.820) | 14/264 | 0.3 | 100% | coding (1290/1293 nt) | kguT | 2‑ketogluconate transporter, putative |
| ? | NC_002947 | 3823869 = | 0 (0.000) | coding (1280/1293 nt) | kguT | 2‑ketogluconate transporter, putative | |||||
CGGGCCAGGGCATCGGGCTGGGTGGTGTCCACCCAGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3823733‑3823859‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACCACACATGAACAGGTAAGAGGCGCCGGGCCCGCCCGTAGCCCCATTG > NC_002947/3823869‑3824003 CGGGCCAGGGCATCGGGCTGGGTGGTGTCCACCCAGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTAAGCCAGACGC > 1:513505/1‑136 GCTGGGTGGTGTCCACCCAGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTAAGCCAGACGCGAGCTATCGCGCTTTG > 1:286273/1‑136 GCTGGGTGGTGTCCACCCAGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTAAGCCAGACGCGAGCTATCGCGCTTTG > 1:93312/1‑136 GTGGTGTCCACCCAGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTAAGCCAGACGCGAGCTATCGCGCTTTGCCCGG < 2:27717/136‑1 ACCCAGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTAAGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTC > 1:55018/1‑136 CCCAGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTAAGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCT < 2:329721/136‑1 AGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTATATACAGGACGATACGCTTCTTCATTGCAGGTTTCCTAAGCCAGACGAGACCTATCGCCCTTAGCCCGGCCAGAGGTCTGGG > 2:90274/1‑136 CACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTAAGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGT < 1:291352/136‑1 GCAGGCGTGCCACCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTGCCTAAGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAA < 1:184699/136‑1 TTTTTACAGGACGATTCGGTTCTTCATTGCAGGTTTCCTAAGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGTGGTCTGGTAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACCACACAT < 2:363235/136‑1 GATTCGCTTCTTCATTGCAGGTTTCCTAAGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACCACACATGAACAGGTctgt > 1:235005/1‑132 GATTCGCTTCTTCATTGCAGGTTTCCTAAGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACCACACATGAACAGGTAAGA > 1:498699/1‑136 GATTCGCTTCTTCATTGCAGGTTTCCTAAGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACCACACATGAACAGGTAAGA > 1:361681/1‑136 GATTCGCTTCTTCATTGCAGGTTTCCTAAGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACC < 2:227903/118‑1 GATTCGCTTCTTCATTGCAGGTTTCCTAAGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACC > 1:227903/1‑118 TTGCAGGTTTCCTAAGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACCACACATGAACAGGTAAGAGGCGCCGGGCCCGC < 2:513505/136‑1 AGGTTTCCTAAGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACCACACATGAACAGGTAAGAGGCGCCGGGCCCGCCCGT > 2:415521/1‑136 AGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACCACACATGAACAGGTAAGAGGCGCCGGGCCCGCCCGTAGCCCCATTG > 2:507614/1‑136 CGGGCCAGGGCATCGGGCTGGGTGGTGTCCACCCAGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3823733‑3823859‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACCACACATGAACAGGTAAGAGGCGCCGGGCCCGCCCGTAGCCCCATTG > NC_002947/3823869‑3824003 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |