Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | NC_002947 | 3,823,860 | Δ9 bp | coding (1281‑1289/1293 nt) | kguT ← | 2‑ketogluconate transporter, putative |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_002947 | 3823860 | 3823868 | 9 | 19 [0] | [0] 18 | kguT | 2‑ketogluconate transporter, putative |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3823859 | 0 (0.000) | 18 (0.820) | 14/264 | 0.3 | 100% | coding (1290/1293 nt) | kguT | 2‑ketogluconate transporter, putative |
? | NC_002947 | 3823869 = | 0 (0.000) | coding (1280/1293 nt) | kguT | 2‑ketogluconate transporter, putative |
TCGCGCAGGCGGGCCAGGGCATCGGGCTGGGTGGTGTCCACCCAGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTAATGGTTCATGGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACCACACATGAACAGGTAAGAGGCGCCGGGCCCGCCCGTA > NC_002947/3823724‑3823994 | tCGCGCAGGCGGGCCAGGGCATCGGGCTGGGTGGTGTCCACCCAGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTaa > 1:556997/1‑136 (MQ=255) cGGGCCAGGGCATCGGGCTGGGTGGTGTCCACCCAGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTAAgccagacgc > 1:513505‑M1/1‑127 (MQ=255) gCTGGGTGGTGTCCACCCAGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTAAgccagacgcgagctatcgcgctttg > 1:286273‑M1/1‑111 (MQ=255) gCTGGGTGGTGTCCACCCAGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTAAgccagacgcgagctatcgcgctttg > 1:93312‑M1/1‑111 (MQ=255) gtggtgTCCACCCAGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTAAgccagacgcgagctatcgcgctttgcccgg < 2:27717‑M1/136‑31 (MQ=255) aCCCAGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTAAgccagacgcgagctatcgcgctttgcccggccagaggtc > 1:55018‑M1/1‑97 (MQ=255) cccAGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTAAgccagacgcgagctatcgcgctttgcccggccagaggtct < 2:329721‑M1/136‑41 (MQ=255) aGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTATATACAGGACGATACGCTTCTTCATTGCAGGTTTCCTAAgccagacgagacctatcgcccttagcccggccagaggtctggg > 2:90274‑M1/1‑93 (MQ=255) cACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTAAgccagacgcgagctatcgcgctttgcccggccagaggtctgggaagt < 1:291352‑M1/136‑48 (MQ=255) gCAGGCGTGCCACCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTGCCTAAgccagacgcgagctatcgcgctttgcccggccagaggtctgggaagtattgagcgcagcggtaa < 1:184699‑M1/136‑65 (MQ=255) ttttTACAGGACGATTCGGTTCTTCATTGCAGGTTTCCTAAgccagacgcgagctatcgcgctttgcccggccagtggtctggtaagtattgagcgcagcggtaagcgccactgcagtcagcagcgcaccacacat < 2:363235‑M1/136‑96 (MQ=255) gATTCGCTTCTTCATTGCAGGTTTCCTAAgccagacgcgagctatcgcgctttgcccggccagaggtctgggaagtattgagcgcagcggtaagcgccactgcagtcagcagcgcaccacacatgaacaggtctgt > 1:235005‑M1/1‑29 (MQ=255) gATTCGCTTCTTCATTGCAGGTTTCCTAAgccagacgcgagctatcgcgctttgcccggccagaggtctgggaagtattgagcgcagcggtaagcgccactgcagtcagcagcgcaccacacatgaacaggtaaga > 1:498699‑M1/1‑29 (MQ=255) gATTCGCTTCTTCATTGCAGGTTTCCTAAgccagacgcgagctatcgcgctttgcccggccagaggtctgggaagtattgagcgcagcggtaagcgccactgcagtcagcagcgcaccacacatgaacaggtaaga > 1:361681‑M1/1‑29 (MQ=255) gATTCGCTTCTTCATTGCAGGTTTCCTAAgccagacgcgagctatcgcgctttgcccggccagaggtctgggaagtattgagcgcagcggtaagcgccactgcagtcagcagcgcacc < 2:227903‑M1/118‑90 (MQ=255) gATTCGCTTCTTCATTGCAGGTTTCCTAAgccagacgcgagctatcgcgctttgcccggccagaggtctgggaagtattgagcgcagcggtaagcgccactgcagtcagcagcgcacc > 1:227903‑M1/1‑29 (MQ=255) ttGCAGGTTTCCTAAgccagacgcgagctatcgcgctttgcccggccagaggtctgggaagtattgagcgcagcggtaagcgccactgcagtcagcagcgcaccacacatgaacaggtaagaggcgccgggcccgc < 2:513505‑M1/136‑122 (MQ=255) aGGTTTCCTAAgccagacgcgagctatcgcgctttgcccggccagaggtctgggaagtattgagcgcagcggtaagcgccactgcagtcagcagcgcaccacacatgaacaggtaagaggcgccgggcccgcccgt > 2:415521‑M1/1‑11 (MQ=255) agccagacgcgagctatcgcgctttgcccggccagaggtctgggaagtattgagcgcagcggtaagcgccactgcagtcagcagcgcaccacacatgaacaggtaagaggcgccgggcccgcccgtagccccattg > 2:507614‑M1/1‑1 (MQ=255) | TCGCGCAGGCGGGCCAGGGCATCGGGCTGGGTGGTGTCCACCCAGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTAATGGTTCATGGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACCACACATGAACAGGTAAGAGGCGCCGGGCCCGCCCGTA > NC_002947/3823724‑3823994 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |