New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 1780108136 (0.390)41 (0.120) 33/282 16.0 23.5% intergenic (+25/+81) PP_1587/dapC NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
?NC_002947 1780171 = 137 (0.410)intergenic (+88/+18) PP_1587/dapC NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 155 total aligned reads displayed.

GGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGACAGGTACGACC  >  NC_002947/1780023‑1780319
                                                                                                                                                    |                                                                                                                                                     
 gtgCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACGGCGCTGCGCTTTAAATCAGCGCTGTACCGGGGGGAGCGGGCGTg                                                                                                                                                      >  2:2198260/1‑149 (MQ=255)
  tgCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACACGTACAGCGCTGCGCGTGGAATAGGCGCTGTTACGGTGGGGGCGGGCGTGc                                                                                                                                                     >  1:4032797/1‑149 (MQ=255)
  tgCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCGCCCACCGGTACTGCGCGGGGGGTGGAAACAGCGCGGTACCGGTGGGAGCGGGCGTGc                                                                                                                                                     >  1:3938868/1‑149 (MQ=255)
  tgCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCCCTCCCCCAGGTACTGCGCTGCGCGTGAAAACAGCCCGGTACCGGTGGGAGCgggcgggc                                                                                                                                                     >  1:1688446/1‑149 (MQ=255)
         aGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCGGTACCTGTGGGAGCGGGCGTGCCCGCG‑aa                                                                                                                                             >  2:1674406/1‑149 (MQ=255)
             cTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCCCGCCCCCCGGGACTGCGCGGCGCGGGAAAACACCGCGGTCCCAGGGGGAGCGGGCGTGGCCGCC‑AAgcgg                                                                                                                                         >  1:4576008/1‑149 (MQ=255)
             cTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCCCGCCCACACGTTATGGGCTGGGCGTTTAATAAGCGCGGTAACAGGGGGTGGGGGCGGGCCCCCG‑GCgggg                                                                                                                                         >  1:4575993/1‑149 (MQ=255)
              tGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACGGCGCTGCGCTTGAAAGCAGCGCAGTACCTGGGGGAGCGGGCGTGCCCGCG‑AAggggg                                                                                                                                        >  2:1445379/1‑148 (MQ=255)
               gggTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCCCGCCCACCCGGACTGCGCAGCCCGTGAAATCAGCCCGGGAACAGTGGGAGCGGGCGTGCCCGCG‑AAcggggt                                                                                                                                       >  1:5447801/1‑147 (MQ=255)
                 gTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGAGCTGCGCTTGAAATCAGCGCTGTACCTGGGGGAGCGGGCGGGCCCGCG‑AAGGGGTTGa                                                                                                                                     >  2:6693322/1‑149 (MQ=255)
                  tGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCGCCCACAGGTAATGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGAt                                                                                                                                    >  2:5133424/1‑149 (MQ=255)
                          atatGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACATCGCTGCGCTTGAAAACAGCGCTGTACCGGTGGGAGCGGGCGTGCCCGCC‑AAGGGGTTGATAAGCGGtt                                                                                                                            >  2:1929417/1‑149 (MQ=38)
                          atatGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGGACTGCGCTGCGCTTGCAATCAGCGCTGTACCGGGGGGCGCGGGCGGGCCCGCG‑CAGGGGTTGATCAGCgggt                                                                                                                            >  2:6402691/1‑147 (MQ=255)
                            atGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCGGTGGGAGCGGGCGTGCCCGCG‑AAGGGGGTGTTCAGCGGtttt                                                                                                                          >  2:7127449/1‑149 (MQ=255)
                            atGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCGCCCCCACGTACGGCGCGGCGCGTGCAAACAGCCCTGTAACAGTGGGAGCGGGCGTGCCCGCG‑GAGGGGGTTGTCAGGGGtttt                                                                                                                          >  1:2911666/1‑149 (MQ=255)
                            atGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCCCTCCCACAGGGACGGCGCTGCGCGTGTAAAAAGCGCGGTACCGGTGGGAGCGGGCGGGCCCGCG‑CAGGGGGTGATCAGCGGtttt                                                                                                                          >  1:6752826/1‑149 (MQ=255)
                            atGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCCCGCCCACAGGGACTGCGCTGCGCTTGAGATCAGCGCTGTACCTGGGGGAGCGGGCGTGCCCGCG‑TACGGGGTGTGAAGCGGgttt                                                                                                                          >  1:6752812/1‑149 (MQ=255)
                              gagtgagGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCCCCGGTAATGCGCTGGGGTTGTAAACAGCGCTGTTCCGGTGGGGGCGGGGGTGCCCGCG‑GCGGGGTTGGTAAGCGGGTTTGc                                                                                                                        >  2:215593/1‑149 (MQ=255)
                                    ggCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCGCCCACAGGTACAGCGCGGCGCTTGAAATCAGCGCTGTACCAGTGGGAGCGGGCGTGCCCCCG‑AAGGGGTTGATCAGCGGGTTTGCAGGAAg                                                                                                                  >  1:7521099/1‑149 (MQ=255)
                                                      cAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCGGCGCGTGAAAAAAGCGCGGTACCGGTGGGGGCGGGCGTGCCCGCG‑GAGGGGGTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTccgcc                                                                                                >  1:4331128/1‑149 (MQ=37)
                                                      cAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCGCCCACAGGTACTGCGCTGCGCTTGAAAACAGCGCGGTTCCGGTGGGCGCGGGCGTGCCCGCGCACGGGGTTG‑TCAGCGGTTTTTCAGGAAGGCGCGCCGGCGCTccgcc                                                                                                >  2:4120765/1‑149 (MQ=255)
                                                         gttgACCCTATCACGGCCCTGGGGGGGGGGGCCCGCACCCCCGGGTACTGGGGTGCGTTTTAAATCCGGGCTGAACGGGGGGGCGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCt                                                                                             <  2:4248491/146‑1 (MQ=255)
                                                         gTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCt                                                                                             >  2:5533301/1‑149 (MQ=255)
                                                            gACCCTATCAAGGCCCTTCGCGGGCGCGCCCACTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGGGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCg                                                                                          <  2:4041230/149‑1 (MQ=255)
                                                               ccTATCAAGGCCCTTCGCGGGCGCGCCCGCGCCCACAGGGACGGCGCTGCGCGTGGAAACAGCGCGGTACCGGGGGGCGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGGTTTGCAGGAAGGCGCGCATGCGCTCCGCCCCGGCGATg                                                                                       >  2:1368118/1‑149 (MQ=25)
                                                                cTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGTTCAGCGGTTTTGCCGGGAGGCGCGAATGCGCTCCGCCGCGTCGATGc                                                                                      >  2:7076015/1‑149 (MQ=255)
                                                                      aGGCCCTTCGCGGGCGCGCCCGCGCCCACCGGGACTGCGCTGCGCTGGGAATCAGCGCTGTACCGGGGGGAGCGGGCGGGCCCGCG‑AAGGGGGTGGTCAGCGGGTTTGCAGGAAGGCGCGAAGGCGCGCCGCCGCTTCGCTGCCGTCgg                                                                                >  2:7350787/1‑149 (MQ=255)
                                                                        gCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTTCGCTGCGCTTGAAATCAGCGCTGTACCGGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCGTCGAAGCATTCGGcc                                                                              >  2:7492414/1‑149 (MQ=255)
                                                                         cccTTCGCGGGCGCGCCCGCGCCCCCAGGGGCTGCCCAGCGCGTTAAAGCCCCGCGGTACCAGTGGGAGCCGGCGGGCCCGCC‑CCCGGGGTTAGCCCCGGGTTTGCAGGCAGGCGCGCAAGCGCACCCCCGCCGCGCTGCAGTCGGccc                                                                             >  2:1553700/1‑148 (MQ=255)
                                                                                  ggCGCGCCCGCTCCCACAGGTACTGCGCTGCGCGTGAAAACAGCGCTGTACCGGGGGGAGCGGGCGTGCCCGCG‑AACGGGTTGATAAGCCGTTTTGCAGGAAGGCCCGAAATCGCACCGCCGCGTCGATGCATTCGGCCACCGGTGCaa                                                                    >  2:3941775/1‑149 (MQ=37)
                                                                                   gcgcgcCCGCGCCCACAGGTACTGCGCTGCGCTTGAAATAAGCCCGGTACCTGTGGGAGCGGGCCAGCCCGCG‑AAGGGGTTGAACAGCGGTTTTGGAGGAAGGCGCGAATTCGCTCCCCCCCTTCGATGCATTCGGCCCGCGGTGCAAc                                                                   >  2:3406364/1‑149 (MQ=255)
                                                                                      cgcCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAg                                                                >  2:3055494/1‑149 (MQ=255)
                                                                                        cccGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTg                                                              >  2:7514573/1‑149 (MQ=255)
                                                                                        cccGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAACGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTg                                                              >  1:5214878/1‑149 (MQ=255)
                                                                                            cTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCAt                                                          >  1:2003891/1‑149 (MQ=255)
                                                                                            cTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCAt                                                          >  2:5025910/1‑149 (MQ=255)
                                                                                            cTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCAt                                                          >  2:433670/1‑149 (MQ=255)
                                                                                                cacaGGTACTGCGCTGCGCTTGAACTCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATgcgc                                                      >  2:6839633/1‑149 (MQ=255)
                                                                                                cacaGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATgcgc                                                      >  1:5290300/1‑149 (MQ=255)
                                                                                                cacaGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATgcgc                                                      >  2:1941756/1‑149 (MQ=255)
                                                                                                cacaGGTACTGCGCTGCGCTTGAAATCAGCGATGAACCTGTGGGAGCGGGCGTGCCCGCG‑AAGCGGTTGATCAGCGGTTTTGCAGGAAGTCGCGAATGCTCTCCGCCGCTTCGATGAATTCGGCCAGCGGTGCAACCAGTGCCATgcgc                                                      >  1:1004596/1‑149 (MQ=255)
                                                                                                 acaGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCa                                                     >  1:2804519/1‑149 (MQ=255)
                                                                                                  caGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCAc                                                    >  1:6845712/1‑149 (MQ=255)
                                                                                                  caGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCAc                                                    >  1:7594417/1‑149 (MQ=255)
                                                                                                  caGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCAc                                                    >  1:7594430/1‑149 (MQ=255)
                                                                                                   aGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCAcg                                                   >  2:6052182/1‑149 (MQ=255)
                                                                                                      tACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACgcgc                                                >  2:2793795/1‑149 (MQ=255)
                                                                                                      tACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACgcgc                                                >  1:6299422/1‑149 (MQ=255)
                                                                                                      tACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGAAACCAGTGCCATGCGCACgcgc                                                >  1:3165036/1‑149 (MQ=255)
                                                                                                       aCTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGcc                                               >  2:2000469/1‑149 (MQ=255)
                                                                                                        ctgcgctgcgCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGccc                                              >  2:1199192/1‑149 (MQ=255)
                                                                                                        ctgcgctgcgCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGccc                                              >  1:74963/1‑149 (MQ=255)
                                                                                                         tgcgctgcgcTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCg                                             >  1:4856357/1‑149 (MQ=255)
                                                                                                          gcgctgcgctTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCgg                                            >  1:3932556/1‑149 (MQ=255)
                                                                                                          gcgctgcgctTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCgg                                            >  1:2514528/1‑149 (MQ=255)
                                                                                                             ctgcgctTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCAc                                         >  1:554651/1‑149 (MQ=255)
                                                                                                                   ttGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGt                                   >  1:4397358/1‑149 (MQ=255)
                                                                                                                   ttGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGt                                   >  1:5482699/1‑149 (MQ=255)
                                                                                                                   ttGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGt                                   >  1:5946087/1‑149 (MQ=255)
                                                                                                                   ttGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGAGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGt                                   >  1:4397338/1‑149 (MQ=255)
                                                                                                                    tGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGtt                                  >  1:1750798/1‑149 (MQ=255)
                                                                                                                    tGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCAGCACCCGGGtt                                  >  1:812365/1‑149 (MQ=255)
                                                                                                                     gAAATCCGCGCTTAACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTc                                 <  2:6206991/149‑1 (MQ=255)
                                                                                                                      aaaTCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCa                                >  1:106215/1‑149 (MQ=255)
                                                                                                                      aaaTCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCa                                >  1:116119/1‑149 (MQ=255)
                                                                                                                      aaaTCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCAGGCACCCGGGTTCa                                >  1:7023497/1‑149 (MQ=255)
                                                                                                                      aaaTCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTCATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCa                                >  1:6495657/1‑149 (MQ=255)
                                                                                                                       aaTCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCAc                               >  2:7320237/1‑149 (MQ=255)
                                                                                                                        aTCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCAcc                              >  1:4932972/1‑149 (MQ=255)
                                                                                                                        aTCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCAcc                              >  2:4592142/1‑149 (MQ=255)
                                                                                                                         tCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCAccc                             >  1:1431428/1‑149 (MQ=255)
                                                                                                                            gcgcTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCAt                          >  2:4361269/1‑149 (MQ=255)
                                                                                                                              gcTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATcc                        >  1:152888/1‑149 (MQ=255)
                                                                                                                               cTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCa                       >  1:3053582/1‑149 (MQ=255)
                                                                                                                                tGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCAc                      >  1:7115172/1‑149 (MQ=255)
                                                                                                                                tGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCAc                      >  2:4273306/1‑149 (MQ=255)
                                                                                                                                    ccTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCa                  >  1:1335939/1‑149 (MQ=255)
                                                                                                                                     cTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCAc                 >  1:918288/1‑149 (MQ=255)
                                                                                                                                     cTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCAc                 >  2:6567400/1‑149 (MQ=255)
                                                                                                                                      tgtgGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCAcg                >  1:5928782/1‑149 (MQ=255)
                                                                                                                                        tgGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCAcgcg              >  1:579313/1‑149 (MQ=255)
                                                                                                                                        tgGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCAcgcg              >  1:578918/1‑149 (MQ=255)
                                                                                                                                        tgGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCAcgcg              >  1:2656944/1‑149 (MQ=255)
                                                                                                                                        tgGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCAcgcg              >  2:6997876/1‑149 (MQ=255)
                                                                                                                                         gggcgggggCGTGCCCGCG‑TAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGTATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGa             <  2:2030926/143‑1 (MQ=255)
                                                                                                                                         gggAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGa             >  1:2011359/1‑149 (MQ=255)
                                                                                                                                         gggAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGa             >  2:6040880/1‑149 (MQ=255)
                                                                                                                                         cttcgCGGGCACGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGa             >  1:3375752/5‑149 (MQ=255)
                                                                                                                                           tcgCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGACa           <  2:4681142/147‑1 (MQ=255)
                                                                                                                                           gAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGACa           >  2:7530442/1‑149 (MQ=255)
                                                                                                                                           gAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGACa           >  2:2649714/1‑149 (MQ=255)
                                                                                                                                           gAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGACa           >  2:6487374/1‑149 (MQ=255)
                                                                                                                                             gCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGACAgg         <  2:4576008/149‑1 (MQ=255)
                                                                                                                                               gggCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGACAGGTa       >  2:5286111/1‑149 (MQ=255)
                                                                                                                                                ggCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGACAGGTAc      >  1:6922878/1‑149 (MQ=255)
                                                                                                                                                ggCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGACAGGTAc      >  2:1545500/1‑149 (MQ=255)
                                                                                                                                                 gCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGACAGGTACg     >  2:378786/1‑149 (MQ=255)
                                                                                                                                                  cGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGACAGGTACGa    <  1:3941775/149‑1 (MQ=255)
                                                                                                                                                  cGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGACAGGTACGa    >  2:2393592/1‑149 (MQ=255)
                                                                                                                                                    tGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGACAGGTACGAcc  >  1:6333908/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
GGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGACAGGTACGACC  >  NC_002947/1780023‑1780319

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.