| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4854420 | 1 (0.020) | 10 (0.280) | 4/182 | 2.5 | 53.1% | intergenic (‑124/+173) | recR/ybaB | recombination protein RecR/nucleoid‑associated broad specificity regulator |
| ? | NC_002947 | = 4854479 | 17 (0.470) | intergenic (‑183/+114) | recR/ybaB | recombination protein RecR/nucleoid‑associated broad specificity regulator | |||||
GCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCG > NC_002947/4854285‑4854553 | gCTGAAGGTAATGGTAATGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG < 2:163321‑M1/136‑1 (MQ=255)gCTGAAGCTCATGGGAAAGGCCTGACTATTCAATAAGAGGCGGTTTATGCCGAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG < 1:285068‑M1/136‑1 (MQ=255)gCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG < 2:916288‑M1/136‑1 (MQ=255)gCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG < 2:460572‑M1/136‑1 (MQ=255)gCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG < 2:1197705‑M1/136‑1 (MQ=255)gCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG < 1:902686‑M1/136‑1 (MQ=255)gCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG < 1:795896‑M1/136‑1 (MQ=255)gCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG < 1:761820‑M1/136‑1 (MQ=255)gCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG < 1:114278‑M1/136‑1 (MQ=255)gCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG < 2:639141‑M1/136‑1 (MQ=255)gCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG < 2:64255‑M1/136‑1 (MQ=255)gCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG < 1:332200‑M1/136‑1 (MQ=255)gCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG < 1:316649‑M1/136‑1 (MQ=255)gCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG < 1:242999‑M1/136‑1 (MQ=255)gCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG < 1:1849‑M1/136‑1 (MQ=255) gcagcTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTGTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGgcg < 1:336406‑M1/134‑4 (MQ=255) tCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGctgcgaagcggccccgggatttcagcttc < 1:503670‑M1/136‑30 (MQ=255) tCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGctgcgaagcggccccgggatttcagcttc < 1:789292‑M1/136‑30 (MQ=255) tCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGGGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGgcgcgaagcggccccgggatttcagcttc < 1:645064‑M1/136‑30 (MQ=255) taCCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGgcgcgaagcggccccgggatttcagcttcgcagcacagagtgccggg < 1:153402‑M1/136‑48 (MQ=255) aacCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGgcgcgaagcggccccgggatttcagcttcgcagcacagagtgccggg < 1:740521‑M1/135‑48 (MQ=255) aCCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGgcgcgaagcggccccgggatttcagcttcgcagcacagagtgccgggg < 1:563831‑M1/136‑49 (MQ=255) aCCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGgcgcgaagcggccccgggatttcagcttcgcagcacagagtgccgggg < 1:374666‑M1/136‑49 (MQ=255) aCCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGgcgcgaagcggccccgggatttcagcttcgcagcacagagtgccgggg < 1:140624‑M1/136‑49 (MQ=255) aCCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGGGCCGCGAAAGGGgcgcgaagcggccccgggatttcagcttcgcagcacagagtgccgggg < 2:822748‑M1/136‑49 (MQ=255) gggCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACACGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGGTGAAATCTCCGCAAAAAAAAccc > 2:1248746/1‑135 (MQ=255) | GCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCG > NC_002947/4854285‑4854553 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |