New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	3852834 =	43 (0.900)	6 (0.140)	6/260	5.2	13.7%	intergenic (‑50/+56)	ilvB/ivbL	acetolactate synthase 2 large subunit/ilvB operon leader peptide
	?	NC_000913_3_bme_pgi	3852867 =	36 (0.820)					intergenic (‑83/+23)	ilvB/ivbL	acetolactate synthase 2 large subunit/ilvB operon leader peptide
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGTCACAATCTTAATGCCCTGCTGTTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGCCGACGACCACCACCACACGCACGACGACCACTGCGGCGGATGGCGCAGTTGGTAGTAGTTTTGCGTTGAGCATGGAA  >  NC_000913_3_bme_pgi/3852689‑3852980                                                                                                                                                  |                                                                                                                                                   tGTCACAATCTTAATGCCCTGCTGTTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATTCTCCAGTCCTTTTCTTCTGGGCCGACTTTCAGGGAGGTGCTTAAACGcaaaa                                                                                                                                                 >  1:392801/1‑149 (MQ=255)   tCACAATCTTAATGCCCTGCTGTTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAAcc                                                                                                                                               <  1:605312/149‑1 (MQ=255)     acaATCTTAATGCCCTGCTGTTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAAcccc                                                                                                                                             >  2:183826/1‑149 (MQ=255)             aaTGCCCTGCTGTTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGtt                                                                                                                                     >  2:516388/1‑149 (MQ=255)                gCCCTGCTGTTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTgc                                                                                                                                  >  2:60492/1‑149 (MQ=255)                     gctgTTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCcgg                                                                                                                             >  2:191721/1‑149 (MQ=255)                           ccAGGTAATGAACGATAAATTCTGCTCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGt                                                                                                                       <  1:755288/149‑1 (MQ=255)                             aGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGttt                                                                                                                     >  2:329052/1‑149 (MQ=255)                              ggAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGtttt                                                                                                                    <  1:711808/149‑1 (MQ=255)                                    taaCGATAAATTCTGCGCCGGTAAAGCGCGTACGCGTCTATGTGGTGCTCGAACTTGCCATGCTCCAGTCCTTTCCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATc                                                                                                              <  2:24316/148‑1 (MQ=255)                                    aaaCGATAAATTCTGTGCCGTTAAAGCTCTGAGGCGTTGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATc                                                                                                              <  2:537329/148‑1 (MQ=255)                                     aaCGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGTACTTGCCATGGGCGCGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGGGGGGTTTTGGAATCg                                                                                                             >  1:408696/1‑149 (MQ=255)                                      aCGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGATGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCgt                                                                                                            <  1:555373/149‑1 (MQ=255)                                        gATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCgtgt                                                                                                          <  1:329052/149‑1 (MQ=255)                                                cTGCGCGGGTAAATCGCTTACGCGTCGGTGTTGTGCCAGAACTAGCGATGGTTCAGACCTTGTCTTCTGGGTCGCCTTTCCAGGGGGTGCTTAAACGAAAAGCCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAAGCGTGTGTTGTTcc                                                                                                  <  2:451347/149‑1 (MQ=255)                                                    gcctggaaaGCGCTTACGCGTCGATGTTGTGCCCGAACTGGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTc                                                                                              <  1:656001/143‑1 (MQ=255)                                                            aGCCCTTACGCGTTGATGTTGTGCCCGAACTTGCCGTGCTCCATTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGgc                                                                                      <  2:550329/149‑1 (MQ=255)                                                                  tACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTg                                                                                <  2:408696/149‑1 (MQ=255)                                                                     ggttCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCGTCTCCGCAGTAAATTGGTTAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCCGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGCcg                                                                             <  1:406064/146‑1 (MQ=255)                                                                     gcgTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGCcg                                                                             >  1:351206/1‑149 (MQ=255)                                                                         cGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGCcgacga                                                                         <  2:572831/149‑1 (MQ=255)                                                                              ttgtGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGCCGACGaccacc                                                                    <  1:486365/149‑1 (MQ=255)                                                                               tgtgCCCGAACTTGCTATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGCCGACGaccacca                                                                   <  1:5617/149‑1 (MQ=255)                                                                                  gCCCGAACTTGCCATCCTCCAGTCCTTTTCTTATGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCGCGTTCCTCCGGCGCATTGCCGCCGAccaccacca                                                                >  2:594692/1‑149 (MQ=255)                                                                                    ccGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGCAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTATGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGCCCACGACCCCCACcaca                                                              >  2:171566/1‑149 (MQ=255)                                                                                     cGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGCCGACGACCCCCACCacac                                                             >  1:206750/1‑149 (MQ=255)                                                                                              cATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTGAGGCGCATTGCCGCCGACCACCACCACACGCAcggcga                                                    >  2:110237/1‑149 (MQ=255)                                                                                                        tctttttCTTCTGGGCCGACTTTCCGGTAGGTGGTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGCATCGTGTGTGGTTCCAGTCCCTACGGCGCATTGCCTACGACTTCCTCTACACGCACGACGACCACTgcggc                                          <  2:729679/146‑1 (MQ=255)                                                                                                           ttttCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGCCGACGACCACCACCACACGCACGACGACCCCTCCGGCGGa                                       >  1:643955/1‑149 (MQ=255)                                                                                                            tttCTTCTGGGTCGACTTTCCGGGAGGTGCTTAAACGAAAATCTCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGGCCCTACGGCGCATTGCCGACGACCACCACCACACGCACGACGACCACTGCGGCGGAt                                      <  1:220885/149‑1 (MQ=255)                                                                                                             ttcgtcTCGGCGGATTTTCCGCGAGGTGCTAAAGCGAAAAACCCCGCCCGGTTGGGGCGGGCGGGGATTTGGAACCGTGTGTTGTGCCAGTCCCTACGGCGCAGTGCCGACGACCCCCACCACACGCACGACGACCACTGCGGCGGATg                                     <  2:682733/149‑1 (MQ=255)                                                                                                                  ctGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGCCGACGACCACCACCACACGCACGACGACCACTGCGGCGGATGGCGCa                                <  1:191721/149‑1 (MQ=255)                                                                                                                     gtccGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGCCGACGACCACCACCACACGCACGACGACCACTGCGGCGGATGGCGCAGtt                             <  1:711538/147‑1 (MQ=255)                                                                                                                     ggCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGCCGACGACCACCACCACACGCACGACGACCACTGCGGCGGATGGCGCAGtt                             >  1:439776/1‑149 (MQ=255)                                                                                                                     ggCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGACGACGACCACCACCACACGAACGTCCCCAGCTTTGGCGGATGgcgccggt                             >  2:172135/1‑145 (MQ=255)                                                                                                                       ccGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGCCGACGACCACCACCACCCGCACGACGACCACTGCGGCGGATGGCGCAGTTgg                           >  2:303260/1‑149 (MQ=255)                                                                                                                         gACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGCCGACGACCACCACCACACGCACGACGACCACTGCGGCGGATGTCGCAGTTGgta                         <  1:516388/149‑1 (MQ=255)                                                                                                                         gACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGGTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGCCGACGACCACCACCACACGCACGACGACCACTGCGGCGGATCGCGCAGTTGgta                         >  2:570568/1‑149 (MQ=255)                                                                                                                                 gggCGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGCCGACGACCACCACCACACGCACGAAGACCACTGCGGCGGATGGCGCAGTTGGTAGTAGtttt                 <  2:201054/149‑1 (MQ=255)                                                                                                                                       tGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGCCGACGACCACCACCACACGCACGACGACCACTGCGGCGGATGGCGCAGTTGGTAGTAGTTTTGCGTTg           >  1:741103/1‑149 (MQ=255)                                                                                                                                          ttAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGCCGACGACCACCACCACACGCACGACGACCACTGCGGCGGATGGCGCAGTTGGTAGTAGTTTTGCGTTGAGc        >  1:582229/1‑149 (MQ=255)                                                                                                                                               cGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGGCGACGACCACCACCACACGCACGACGACCACTGCGGCGGATGGGGCTGTTGGTGGTAGTTTTGCGTTGAGCATggg   >  2:292978/1‑148 (MQ=255)                                                                                                                                                gAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGCCGACGACCACCCCCACACGCACGACGACCACTGCGGCGGATGGCGCAGTTGGTAGTAGTTTTGCGTTGAGCATGGaa  <  1:607539/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                   TGTCACAATCTTAATGCCCTGCTGTTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCGGGGTTTTGGAATCGTGTGTTGTTCCAGTCCCTACGGCGCATTGCCGACGACCACCACCACACGCACGACGACCACTGCGGCGGATGGCGCAGTTGGTAGTAGTTTTGCGTTGAGCATGGAA  >  NC_000913_3_bme_pgi/3852689‑3852980

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.