New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_KO_pgi	= 1983561	73 (2.010)	5 (0.140)	5/268	4.2	7.2%	coding (1509/1515 nt)	araG	L‑arabinose ABC transporter ATPase
	?	NC_000913_3_KO_pgi	= 1983596	60 (1.740)					coding (1474/1515 nt)	araG	L‑arabinose ABC transporter ATPase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCA  >  NC_000913_3_KO_pgi/1983450‑1983741                                                                                                                                                   |                                                                                                                                                  acacCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGGATCGCAAGGCTCAGTg                                                                                                                                                 <  1:556678/149‑1 (MQ=255)  caccacCAGGCTGGCGTACTGATCCCAGATACGTCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGc                                                                                                                                                <  2:592375/149‑1 (MQ=255)   accaccAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGcc                                                                                                                                               >  1:115820/1‑149 (MQ=255)     caccaGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAACCAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTg                                                                                                                                             >  2:427625/1‑149 (MQ=255)        caGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACg                                                                                                                                          <  1:613951/149‑1 (MQ=255)         aGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGc                                                                                                                                         <  2:555538/149‑1 (MQ=255)           cATGCCGTATTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTc                                                                                                                                       >  2:101497/1‑149 (MQ=255)               ccGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTCCCTGACGCTCATca                                                                                                                                   >  2:160905/1‑148 (MQ=255)                cGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTGTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATctg                                                                                                                                  >  1:598456/1‑149 (MQ=255)                 gTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCCTACTCAGCCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATctgc                                                                                                                                 <  1:502819/149‑1 (MQ=255)                          ccAGACACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCCACCGCCTTTCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCgtg                                                                                                                        <  1:601625/149‑1 (MQ=255)                             gATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTaa                                                                                                                     <  1:106832/149‑1 (MQ=255)                             gATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAAAACCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTaa                                                                                                                     <  1:153863/149‑1 (MQ=255)                                aCGCCCGAAGCTGAATGACGCCTTAGTTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACaa                                                                                                                  <  2:287224/149‑1 (MQ=255)                                 cGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAAt                                                                                                                 <  2:115820/149‑1 (MQ=255)                                    ccGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGAc                                                                                                                                           >  1:632826/1‑120 (MQ=255)                                    ccGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGAc                                                                                                                                           <  2:632826/120‑1 (MQ=255)                                    ccGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCa                                                                                                              >  1:227624/1‑149 (MQ=255)                                       aaGCTGAATGACGACTTAGGTGCGCCAGACCCCGATTTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCg                                                                                                           <  1:53869/149‑1 (MQ=255)                                       aaGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCg                                                                                                           <  1:54088/149‑1 (MQ=255)                                        aGCAGAACGACTACTTAGGTGCGCCAGAACCCGAGGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTACGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCgg                                                                                                          <  2:14374/149‑1 (MQ=255)                                            gAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGAt                                                                                                      >  1:209741/1‑149 (MQ=255)                                             aaTGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGt                                                                                                                                                  <  1:372457/104‑1 (MQ=255)                                             aaTGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGt                                                                                                                                                  >  2:372457/1‑104 (MQ=255)                                             aaTGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGAtt                                                                                                     >  1:173391/1‑149 (MQ=255)                                                      ttgggTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATCCTCTCCTTACGCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTcc                                                                                            <  1:531841/146‑1 (MQ=255)                                                            gcgcCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATc                                                                                      <  1:72848/149‑1 (MQ=255)                                                                cAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATcacca                                                                                  >  1:236908/1‑149 (MQ=255)                                                                    ccccGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAAt                                                                              >  1:430029/1‑149 (MQ=255)                                                                     cccGATGTAGAAAGAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCAGGCTGACTTTAGGCATCGCAAGGATCAGCGCCAGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCAGCTTCCCGCATCCCCCCAATc                                                                             >  1:523306/1‑149 (MQ=255)                                                                     cccGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATc                                                                             >  2:70153/1‑149 (MQ=255)                                                                       cGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCg                                                                           <  1:427625/149‑1 (MQ=255)                                                                         aTGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAAGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTACCAGTTCACCAGCGATTTCACCTTCCCGCCTCACCACCATCCCGt                                                                         >  2:402613/1‑149 (MQ=255)                                                                          tGTAGTAACAGAAGACATCAGACTCTCCGTACCCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTc                                                                        <  1:39052/149‑1 (MQ=255)                                                                                aaCAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAAc                                                                  <  1:70153/149‑1 (MQ=255)                                                                                    gaagaCATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGa                                                                                                                                            >  1:113134/1‑71 (MQ=255)                                                                                    gaagaCATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGa                                                                                                                                            <  2:113134/71‑1 (MQ=255)                                                                                    gaagaCATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATGCACCGGCGACTTCACCTTCCCGCATCACCCCAATCTGGCCGGCCACGCCg                                                              >  2:233346/1‑149 (MQ=255)                                                                                     aagaCATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCCCAATCCGATCGGCAACGCCGa                                                             >  2:601427/1‑149 (MQ=255)                                                                                     aagaCATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGa                                                             >  2:118429/1‑149 (MQ=255)                                                                                        aCATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGa                                                          <  2:173391/149‑1 (MQ=255)                                                                                             atACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCa                                                     >  2:606204/1‑149 (MQ=255)                                                                                             atACTCCCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCa                                                     <  2:593375/149‑1 (MQ=255)                                                                                              tACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAg                                                    <  2:227624/149‑1 (MQ=255)                                                                                              tACTCTCCTTACGCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAg                                                    <  2:389838/149‑1 (MQ=255)                                                                                                   tcCTTACTCAGGCAACAGACTGGCTGACTTTAGGCATCGCAAGGCTTAGAGCCTGACGCTCATCTGCATGCCCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGCCTTCAGGTaaa                                               >  2:24663/1‑148 (MQ=255)                                                                                                        aCTCAGGCAACAGCCTGGCTCACTTTAGGCATCGCAAGGCTCACTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACCATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCt                                          <  1:160905/149‑1 (MQ=255)                                                                                                          tCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTgg                                        >  1:233695/1‑149 (MQ=255)                                                                                                             ggCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAgg                                     <  2:598456/149‑1 (MQ=255)                                                                                                              gCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAg                                      <  2:179661/147‑1 (MQ=255)                                                                                                              gCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAg                                      >  1:179661/1‑147 (MQ=255)                                                                                                                     ccTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGc                             <  2:236908/149‑1 (MQ=255)                                                                                                                     ccTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGc                             >  1:426378/1‑149 (MQ=255)                                                                                                                      cTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAg                                      >  1:161507/1‑139 (MQ=255)                                                                                                                      cTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAg                                      <  2:161507/139‑1 (MQ=255)                                                                                                                      cTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCCGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCa                            >  2:369004/1‑149 (MQ=255)                                                                                                                         gCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGCCAACGCCGAGGCCTCCAGGTAAGTCGCTGGAGGCCAACAGCACCg                         >  2:565925/1‑149 (MQ=255)                                                                                                                            caCTTTAGGCATCGCAAGGCGCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCCGTCGGCAACGCCGGTGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCa                      <  1:24663/148‑1 (MQ=255)                                                                                                                             aCTTTAGGAATCGCAAGGCTCAGTGCCTGATGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCAGCACAATCCGGTCGGAAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCAc                     <  1:562734/149‑1 (MQ=255)                                                                                                                              cTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACg                    >  2:353431/1‑149 (MQ=255)                                                                                                                               tttAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGa                                                             >  2:22662/1‑107 (MQ=255)                                                                                                                               tttAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGa                                                             <  1:22662/107‑1 (MQ=255)                                                                                                                               tttAGGCATCGCAAAGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTACCAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGCGGGCAACCACCACCGCCCCGc                   >  2:329953/1‑149 (MQ=255)                                                                                                                                 tAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGccc                 <  2:209741/149‑1 (MQ=255)                                                                                                                                      aTCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTGCGGTAAGTCGCTGGCGGCAAACAGCGCCGCCCCGCCCTgcgc            >  1:121728/1‑149 (MQ=255)                                                                                                                                                tCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCg                                                                       <  1:134368/80‑1 (MQ=255)                                                                                                                                                tCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCg                                                                       >  2:134368/1‑80 (MQ=255)                                                                                                                                                tCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCa  >  1:195612/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                  ACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCA  >  NC_000913_3_KO_pgi/1983450‑1983741

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.