| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_pgi | 4248622 = | NA (NA) | 14 (0.370) | 9/264 | 3.0 | 2.8% | noncoding (42/125 nt) | REP316 (repetitive extragenic palindromic) element; contains 3 REP sequences | REP316 (repetitive extragenic palindromic) element; contains 3 REP sequences |
| ? | NC_000913_3_pae_pgi | 4248654 = | 482 (12.570) | noncoding (74/125 nt) | REP316 (repetitive extragenic palindromic) element; contains 3 REP sequences | REP316 (repetitive extragenic palindromic) element; contains 3 REP sequences | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCAATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_pae_pgi/4248775‑4248622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaggcCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTT > NC_000913_3_pae_pgi/4248654‑4248801 GCAATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATACGACGCGCAAGCCTCGCAT > 2:93122/1‑149GCAATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCAT < 2:575010/149‑1GCAATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCAT < 1:153790/149‑1 CAATAGTGCGTTAAACCCGGTAATCAGAGGGGCTTTCGACCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATC < 1:60332/149‑1 AATAGCTCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA < 2:587408/149‑1 AATAGCGCGCTAAACCCGATAATCAGATGGTCGTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA < 2:326692/149‑1 ATAGCGCGCTAACGCCGACACTCAGCGGGGCTTTCGCCCATCTCAGATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:336949/149‑1 ATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:406554/149‑1 ATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 2:100206/149‑1 TAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTAGCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG < 1:607744/149‑1 TAGCGCGATAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG < 2:116354/149‑1 aaCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGC < 2:331410/147‑1 TAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 2:346655/140‑1 TAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG > 1:346655/1‑140 TTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG > 1:276669/1‑110 TTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG < 2:276669/110‑1 AGATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA < 2:11967/104‑1 AGATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA > 1:11967/1‑104 ATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATC > 1:321520/1‑101 ATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATC > 1:321474/1‑101 ATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATC < 2:321520/101‑1 ATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATC < 2:321474/101‑1 GCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGCTAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGACAGGGGCGAAAGCCCCTCTGATTATCGGGT > 1:81350/1‑149 GCCTGATAAGACGCGCAAGCGTCGCATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCT > 2:332322/1‑149 GCCTGATAAGACGCGCAAGCGTCGCATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCC < 1:164613/75‑1 GCCTGATAAGACGCGCAAGCGTCGCATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCC > 2:164613/1‑75 CCTGATAAGACGCGCAAGCGTCGCATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTA > 1:386314/1‑149 CCTGATAAGACGCGCAAGCGTCGCATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTA > 1:22294/1‑149 CCTGATAAGACGCGCAAGCGTCGCATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTAT < 1:160455/104‑1 CCTGATAAGACGCGCAAGCGTCGCATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTAT > 2:160455/1‑104 cgGATAAGACGCGCAAGCGTCGCATCAGGCCTACAACGGCTGTCAAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTAT > 1:720891/3‑149 TGATAAGACGCGCAAGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATT > 1:125793/1‑149 TGATAAGACGCGCAAGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATT > 1:548033/1‑149 GATAAGACGCGCAAGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTG > 2:697212/1‑149 ATAAGACGCGCAAGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGC > 1:156998/1‑149 AGACGCGCAAGCGTCGCATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTG < 2:22294/149‑1 ttTCAGCCCTACAACTGCTTGCAAATGTAGGCCGGATAAGGCGTGTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAGAGGGGCGAAAGCCCGTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCC < 1:634340/147‑1 ATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCA < 1:279414/149‑1 ATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCA > 2:188696/1‑149 ATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCA < 2:28408/149‑1 TCAGGCCTATAACGGCTGTTAAATTTAAGGCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTTTCATTATCTGACAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAG < 2:719914/149‑1 TCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAG > 1:636318/1‑149 TCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGAGTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAG > 1:548193/1‑149 CAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGA < 1:347734/149‑1 CAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGA < 2:493783/149‑1 AGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCGGAT > 1:153272/1‑149 AGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGAT > 2:596745/1‑149 AGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGAGCGAAAGACCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGAT > 1:641732/1‑149 GGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATT < 1:264356/149‑1 GGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATT > 1:77092/1‑149 GCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTT < 1:108553/149‑1 GCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTT > 2:3707/1‑149 GCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTT > 1:206819/1‑149 GCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTT > 2:231599/1‑149 GCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGACCTCCAGATTT > 2:576563/1‑149 GCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAA < 2:654400/81‑1 GCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAA > 1:654400/1‑81 GCCTACAACGGCTGTCAAATGAAGGTCGGATAAGGCTTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCAGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTT > 2:635955/1‑149 CCTAGAACGGTTGTCAAATGTAGGCCGGATAAGGCGTTTCCGGCTCATCCGGGATAAAAACAGTTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTT < 2:81350/149‑1 GCAATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_pae_pgi/4248775‑4248622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaggcCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTT > NC_000913_3_pae_pgi/4248654‑4248801 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |