| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_pgi | 4218568 = | 55 (1.500) | 327 (9.540) | 155/236 | 0.0 | 86.4% | intergenic (+155/‑28) | aceA/aceK | isocitrate lyase/isocitrate dehydrogenase kinase/phosphatase |
| ? | NC_000913_3_pae_pgi | = 4253290 | NA (NA) | noncoding (130/130 nt) | RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | |||||
Only 100 of 451 total aligned reads displayed.
AACCGTTGCTGACTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGC > NC_000913_3_pae_pgi/4218422‑4218716 | tgatgatgtaaaaaagccggatgatcatccggctttattctgggtggcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAAtt < 1:175269‑M1/4‑1 (MQ=255) gatgatgtaaaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATtc < 1:611413‑M1/5‑1 (MQ=255) atgatgtaaaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATtct > 1:14335‑M1/144‑149 (MQ=255) atgtaaaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgtttctcaggcctacacaacacatcgcaatttattggatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTg > 1:518792‑M1/141‑149 (MQ=255) cagaagaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGc < 2:144071‑M1/10‑1 (MQ=255) agaagaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCt > 1:346960‑M1/139‑149 (MQ=255) taaaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcagggctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTc < 1:390549‑M1/12‑1 (MQ=255) aaaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTcc > 1:511698‑M1/137‑149 (MQ=255) aaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCt < 1:444187‑M1/14‑1 (MQ=255) tGTAGGCCGGATAAGGCTTTCACGCCGCATCCGGCAATCGGGGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCtga < 1:418896/149‑1 (MQ=255) agccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagcttatggaaggccggagaaggcgttttcgccgcatccggcAATTCTCTGCTCCtgatg < 2:405203‑M1/18‑1 (MQ=255) gccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCtgatga > 1:52961‑M1/131‑149 (MQ=255) gCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAgg > 1:653052/1‑149 (MQ=255) gatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATtct > 1:262870‑M1/127‑132 (MQ=255) gatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGgc < 2:293603‑M1/23‑1 (MQ=255) tcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctccacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTaa < 1:113073‑M1/28‑1 (MQ=255) aaGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTaa > 1:677217/1‑149 (MQ=255) atccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattattgaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAAt > 1:626655‑M1/120‑149 (MQ=255) atccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAAt > 1:91290‑M1/120‑149 (MQ=255) gCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATAAGGGCGCTAAATg > 2:585186/1‑149 (MQ=255) ggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCcg < 2:500949‑M1/34‑1 (MQ=255) tttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGt < 1:227046‑M1/37‑1 (MQ=255) tttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGt > 2:372616‑M1/113‑149 (MQ=255) ttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTg > 1:720855‑M1/112‑149 (MQ=255) cttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGc > 2:257978‑M1/110‑149 (MQ=255) ttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATtctc > 1:476850‑M1/109‑115 (MQ=255) ttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCGCCGTGGcc < 2:186011‑M1/41‑1 (MQ=255) ttctgggttgcctgatgcgcgccgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTCATGCGGGCGCTAAATGCCGCGTGGcc < 2:635632‑M1/41‑1 (MQ=255) gagaattgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgccgattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTg < 2:112252‑M1/43‑1 (MQ=255) ggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGTCGCTAAATGCCGCACGGCCTGGaa < 2:279626‑M1/46‑1 (MQ=255) gttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAat < 2:527097‑M1/47‑1 (MQ=255) tgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAatta > 1:324255‑M1/101‑149 (MQ=255) cctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAattatt < 1:691905‑M1/51‑1 (MQ=255) cctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAattatt > 1:296046‑M1/99‑149 (MQ=255) aaTCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAattatt < 1:667588/149‑1 (MQ=255) ctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCAGGAATTattg > 1:701915‑M1/98‑149 (MQ=255) gatgcgcgtcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattgat > 1:411554‑M1/96‑149 (MQ=255) gatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattgat < 1:27624‑M1/54‑1 (MQ=255) tgcgcggcgcttcggaggtctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattgattg > 1:456676‑M1/94‑149 (MQ=255) gcgcttttcaggtctagacaactcatcgcaatttattgaatttgcagatgatggaagtttggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCaaa > 2:431‑M1/88‑149 (MQ=255) tctcaggcctacacaacacatcgcaatttattgaatttgcagattctggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCAtt > 2:515401‑M1/83‑149 (MQ=255) tGATGCGACCCTTGCGCGTATTATCATGCCTACAGCCCTTGCCGACCGTNAGCTAGATCAGGCGTTTAAGCCGCATCCGGCAATTCTCTGCTCCTGATCAGAGCCCTACATCAGGCGNGGCCTGGGATTATGGTTTGTTAANAACAttg > 2:321897/1‑148 (MQ=255) aggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCAtttt > 1:180898‑M1/79‑147 (MQ=255) gcctacacaacccatcgccctttatttaagttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCaa > 1:132178‑M1/77‑149 (MQ=255) gcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAAt > 1:489992‑M1/77‑79 (MQ=255) gcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCaa < 1:31607‑M1/73‑1 (MQ=255) ctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCAGTTTGCAAgg < 2:447691‑M1/75‑1 (MQ=255) acacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCa > 2:90446‑M1/73‑144 (MQ=255) acaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcgtccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTc > 2:666546‑M1/71‑149 (MQ=255) acaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTc > 1:543910‑M1/71‑149 (MQ=255) acaacacatcgcaatttattgaattggcagattatggaaggcaggataaggtgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGTCTTc > 2:310165‑M1/71‑149 (MQ=255) aacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGa < 2:389637‑M1/81‑1 (MQ=255) aacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCCAAACGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGa < 1:564479‑M1/81‑1 (MQ=255) cacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCCAAGCTTCCATg < 2:459753‑M1/83‑1 (MQ=255) atcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGa > 2:395572‑M1/64‑144 (MQ=255) atcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGa < 1:395572‑M1/81‑1 (MQ=255) atcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTc > 2:175269‑M1/64‑149 (MQ=255) atcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTc > 2:302181‑M1/64‑149 (MQ=255) atcgcaatttagtgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCtga > 1:285330‑M1/64‑79 (MQ=255) tcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATtctc < 1:305105‑M1/7‑1 (MQ=255) tcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCa < 2:563498‑M1/87‑1 (MQ=255) tcgcaatttattgaatttgcagattatggaaggccggataaggcgtcttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCa < 2:242602‑M1/87‑1 (MQ=255) atattccTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGACGAGGGCGCGAAATGCCGCGTGTCCTGGAATTATTGATTGCTCAAACCAGTTTGCAAGGCTTCGATGCTCAGTAt < 2:677217/144‑1 (MQ=39) gCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTc < 2:653052/149‑1 (MQ=255) ttgaatttgcagattatggaaggccggctaaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGTCTTCGATGCTCAGTATGGTcgg < 2:5953‑M1/97‑2 (MQ=255) ttgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGa < 1:18742‑M1/97‑1 (MQ=255) ttgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGa < 2:47447‑M1/97‑1 (MQ=255) aatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTc < 2:492449‑M1/100‑1 (MQ=255) gcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGa < 2:20459‑M1/105‑1 (MQ=255) ttGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGaa < 1:585186/149‑1 (MQ=255) ttatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGa > 1:600014‑M1/40‑149 (MQ=255) ttatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCGCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGa > 1:24083‑M1/40‑149 (MQ=255) ttatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATCGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGa < 2:618725‑M1/110‑1 (MQ=255) ttatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGACTGGAATTATTGACTACTCAAACCGTTTTGCAAGGCTTCGATGCTCAGTATGCTCGATTCCTCGAAGTGa < 2:609153‑M1/110‑1 (MQ=255) tggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGAc > 1:536283‑M1/37‑147 (MQ=255) tggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGAc < 2:536283‑M1/111‑1 (MQ=255) ggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGCACTCCGGt < 2:348122‑M1/118‑1 (MQ=255) ggccggataaggcgttttcgccgcatccggcAATTCTCCGCGCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGt > 1:200859‑M1/32‑149 (MQ=255) cggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCCAGGCTTCGATGCTCAGTATGTTCGATTCCTCGAAGTGACCTCCGGTgcg < 2:69901‑M1/121‑1 (MQ=255) ggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTa < 2:269710‑M1/90‑1 (MQ=255) gataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCCCAGTATGGTCGATTCCTCCAAGTGACCTCCGGtgcgcc < 2:130320‑M1/123‑2 (MQ=255) aaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAattat > 2:233552‑M1/24‑73 (MQ=255) aaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAattat < 1:233552‑M1/50‑1 (MQ=255) ggccttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCagcagc > 1:436917‑M1/22‑149 (MQ=255) gCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGAt > 2:180086/1‑102 (MQ=255) gttttcgccgcatccggcAATTGTATGCTCCTTATGAGGGCGCTAAAAGCCGCGTGGCCTTGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGtt > 2:479162‑M1/19‑149 (MQ=255) gttttcgccgcatccggcAATTCCTTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGtt > 1:374356‑M1/19‑149 (MQ=255) ttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGttt > 1:78518‑M1/18‑149 (MQ=255) cgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGaa > 2:550575‑M1/14‑149 (MQ=255) cgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAg > 1:363781‑M1/11‑149 (MQ=255) gcATCCGGCAATTCTCTGCTCCTGATGAGGGCGATAAATGCCGCGTTGTCTCGAATTATTGATTAATCATTCCGGTTTCACCGGATTTTATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAgg < 1:172580/149‑1 (MQ=255) atccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGcc > 2:222713‑M1/8‑149 (MQ=255) cggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCt > 1:378169‑M1/5‑106 (MQ=255) cggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCt < 2:378169‑M1/102‑1 (MQ=255) cggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGAc > 1:497355‑M1/5‑149 (MQ=255) cggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGAc < 2:366430‑M1/145‑1 (MQ=255) cggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGAc < 1:101962‑M1/145‑1 (MQ=255) ggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACt < 1:547751‑M1/146‑1 (MQ=255) ggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACt < 2:72721‑M1/146‑1 (MQ=255) AATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGc < 1:268866‑M1/149‑1 (MQ=255) | AACCGTTGCTGACTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGC > NC_000913_3_pae_pgi/4218422‑4218716 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |