| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_pgi | 4218568 = | 55 (1.500) | 327 (9.540) | 155/236 | 0.0 | 86.4% | intergenic (+155/‑28) | aceA/aceK | isocitrate lyase/isocitrate dehydrogenase kinase/phosphatase |
| ? | NC_000913_3_pae_pgi | = 4253290 | NA (NA) | noncoding (130/130 nt) | RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | |||||
Only 100 of 431 total aligned reads displayed.
TTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCAC > NC_000913_3_pae_pgi/4253142‑4253436 | tttCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGC < 1:448342‑M2/149‑1 (MQ=255) atgatgTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattct > 1:14335‑M2/1‑143 (MQ=255) gatgTAAAAAATCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctct > 1:393742‑M2/1‑141 (MQ=255) gatgTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctct > 1:508605‑M2/1‑141 (MQ=255) gatgTAAAAAAGCCGGATGATCAGCCGGCTTGCTTCTGGGTTGGCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctct > 2:24886‑M2/1‑141 (MQ=255) ccagaagaaagccggatGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctg < 1:523129‑M2/142‑10 (MQ=255) atgTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATtctctc < 2:324941/149‑1 (MQ=255) atgTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACAACGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATtctctc < 1:286097/149‑1 (MQ=255) atgTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGAGGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctg < 1:118166‑M2/149‑10 (MQ=255) ggtAAAAAAGCCGTATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgc > 1:675257‑M2/2‑139 (MQ=255) gTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATTCGGCaattctctgct < 1:43243‑M2/149‑12 (MQ=255) gTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgct < 2:91290‑M2/149‑12 (MQ=255) aaaaaaGCCGGATGATCATCCGGCTTTCTGCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACAGCGCAATTGATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGAt < 1:26911/149‑1 (MQ=255) agaaagcCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGCTAAGGCGTTTTCGCCGCATCCGGCaattctctgctcct < 2:670069‑M2/147‑15 (MQ=255) aGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGCTTATGGAAGGCCGGAGAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatg < 2:405203‑M2/149‑19 (MQ=255) aGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatg > 2:279308‑M2/1‑131 (MQ=255) gCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatga > 1:295979‑M2/1‑130 (MQ=255) cGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagg > 2:523129‑M2/1‑128 (MQ=255) cGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagg > 2:611413‑M2/1‑128 (MQ=255) gatgatCATCCGGCGTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggc > 1:260808‑M2/1‑126 (MQ=255) atcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaat > 1:91290‑M2/1‑119 (MQ=255) tcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatg < 1:17425‑M2/149‑32 (MQ=255) cGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGc < 2:129191/149‑1 (MQ=255) gCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgc > 1:280252‑M2/1‑114 (MQ=255) gCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgc > 1:576223‑M2/1‑114 (MQ=255) cTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcg < 1:243866‑M2/149‑37 (MQ=255) tttCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgt < 1:515401‑M2/149‑38 (MQ=255) tttCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAAGCCCGATAAGGCGTCTTCGCCGCATCCGGCaattctctgctcctgatgaaggcgctaaattccgcgt < 2:391924‑M2/149‑38 (MQ=255) ttcttcTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtg > 1:720855‑M2/1‑111 (MQ=255) cttctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggc > 2:294051‑M2/1‑109 (MQ=255) ttctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgcgccgtggcc < 2:186011‑M2/149‑42 (MQ=255) ttctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcc > 2:480905‑M2/1‑108 (MQ=255) ttctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGa < 1:534638/120‑1 (MQ=255) tctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcct < 2:179511‑M2/149‑43 (MQ=255) ctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctg > 2:641516‑M2/1‑106 (MQ=255) tGGGTTGCCTGATGCGAGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCg > 1:628956/1‑149 (MQ=255) gggTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGt > 2:17220/1‑149 (MQ=255) ggTTGCCTGATGCCCGGCGCTTCTCAGGCCTACACAACACTTCGCAACTTATTGCATTTTCAGCTAATGGAAGGACGGATAAGGCGTTTTCGCCGCATCCGGCaatcctctgctcctgatgagggcgctaaatgccgcgtggccaggct < 2:107118‑M2/149‑47 (MQ=255) ttGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaatt > 2:623065‑M2/1‑101 (MQ=255) tGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaatta > 1:324255‑M2/1‑100 (MQ=255) gCCTGACGCGAGCCCCGTGTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattat > 2:475639‑M2/1‑99 (MQ=255) cTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcgtgatggggacgctaaacgccgcgtggcctggaattattg < 2:530704‑M2/149‑53 (MQ=255) tGCGCGGCGCTTCGGAGGTCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattg > 1:456676‑M2/1‑93 (MQ=255) gcggcgCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctc < 1:382944‑M2/149‑60 (MQ=255) gcggcgCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctc < 2:497184‑M2/149‑60 (MQ=255) gcggcgCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgat < 1:371871‑M2/144‑55 (MQ=255) gcgcTTTTCAGGTCTAGACAACTCATCGCAATTTATTGAATTTGCAGATGATGGAAGTTTGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaa > 2:431‑M2/1‑87 (MQ=255) cTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaacca < 1:77750‑M2/149‑66 (MQ=255) tctcAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccatt > 1:231509‑M2/1‑82 (MQ=255) tcAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcggtaaatgacgcgtggcctggaattattgattgctcaaaccatttt > 2:579369‑M2/1‑80 (MQ=255) aGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccatttt > 1:180898‑M2/1‑78 (MQ=255) gCCTACACAACCCATCGCCCTTTATTTAAGTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaa > 1:132178‑M2/1‑76 (MQ=255) gCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaa > 1:656293‑M2/1‑76 (MQ=255) gCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaa < 1:31607‑M2/149‑74 (MQ=255) cTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccagtttgcaagg < 2:447691‑M2/149‑76 (MQ=255) cacaacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggctt < 1:36085‑M2/149‑79 (MQ=255) aacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcga > 2:713641‑M2/1‑68 (MQ=255) aacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcga < 2:78518‑M2/149‑82 (MQ=255) aTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcga > 2:395572‑M2/1‑63 (MQ=255) aTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctga < 2:285330‑M2/79‑17 (MQ=255) tCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctc < 1:305105‑M2/69‑8 (MQ=255) gCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgacgtaataccgcgaaatattgattgctcaaaccattttgcaaggcttcgatgctcagt < 1:21096‑M2/149‑90 (MQ=255) ttATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcttggatttattgattgctcaaaccattttgcaaggcttcgatgctcagtatggt > 2:370401‑M2/1‑55 (MQ=255) aTTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCa > 1:33807/1‑130 (MQ=255) ttGAATTTGCAGATTATGGAAGGCCGGCTAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaagtcttcgatgctcagtatggtcgg < 2:5953‑M2/149‑98 (MQ=255) gAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGt > 2:25911/1‑149 (MQ=255) aTTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggctgcgatgctcagtatggtcgattcc < 2:511883‑M2/149‑102 (MQ=255) ttGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctc < 2:349513‑M2/149‑104 (MQ=255) ttGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctc > 1:61781‑M2/1‑46 (MQ=255) gCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgatagctcaaaccattttgcaaggcttcgatgctcagtctggtcgattcctcga < 2:454728‑M2/149‑106 (MQ=255) aGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctgctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaag < 1:477120‑M2/149‑108 (MQ=255) gATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagt < 1:188342‑M2/149‑109 (MQ=255) aTTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaa < 2:223553‑M2/113‑74 (MQ=255) ttAAGGAAGGCCGGATAAGGCCGTTGCGTCGGATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggactggaaatattgattgctcaaaccacttcgcaagccctcgatgctcagtatggtcgattcctcgaagtga > 2:318035‑M2/1‑39 (MQ=255) tGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgac < 2:536283‑M2/147‑112 (MQ=255) ggAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaa > 2:235138‑M2/1‑35 (MQ=255) ggAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaa < 1:235138‑M2/97‑63 (MQ=255) ggAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAGTCAACTCCGCCGGCAACTGATAAACCTTCATCGTTTCTGCCGGTGCGGc > 1:690108/1‑149 (MQ=255) ggATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagta < 2:269710‑M2/117‑91 (MQ=255) gATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgca > 1:54236‑M2/1‑26 (MQ=255) aaGGCGTTTTCGCCGCATCCGGTaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagca > 2:220226‑M2/1‑23 (MQ=255) aaGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttccatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagca > 2:660260‑M2/1‑23 (MQ=255) ggCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagc < 2:372942‑M2/149‑129 (MQ=255) ggCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagc > 2:306701‑M2/1‑21 (MQ=255) gCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcg < 1:406216‑M2/149‑130 (MQ=255) ttttCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgttt > 1:275806‑M2/1‑17 (MQ=255) ttttCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcaggatggtcgattcctcgacgtgacctccggtgcgcagcagcgttt < 1:592429‑M2/149‑133 (MQ=255) cgccgcATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgtttcgaa > 2:550575‑M2/1‑13 (MQ=255) cgccgcATCCGGCAATTCTCTCTGATTACCGTTCGCACTAAGCCTCGCTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAATCCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATCTAc < 2:690108/149‑1 (MQ=255) ccgcGTCCGGCaattccctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgtttcgaaca > 1:375484‑M2/1‑11 (MQ=255) cgcATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattatcatcggctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgtttcgaacag > 1:707372‑M2/1‑10 (MQ=255) cgcATCCGGCaattctctgctccggatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgtttcgaacag > 1:413454‑M2/1‑10 (MQ=255) tCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctagaagtggcctccggtgcgtcgcagcgtttcgaacaggccg < 1:438800‑M2/149‑144 (MQ=255) ccGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgtttcgaacaggccga > 2:143551‑M2/1‑5 (MQ=255) cGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgtttcgaacaggccgac > 1:497355‑M2/1‑4 (MQ=255) cGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgtttcgaacaggccgac < 1:101962‑M2/149‑146 (MQ=255) cGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcct < 2:378169‑M2/106‑103 (MQ=255) cGGCaattccctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgtttcgaacaggccgac > 1:61032‑M2/1‑4 (MQ=255) ggCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgtttcgaacaggccgact > 1:693554‑M2/1‑3 (MQ=255) ggCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgtttcgaacaggccgact < 1:547751‑M2/149‑147 (MQ=255) | TTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCAC > NC_000913_3_pae_pgi/4253142‑4253436 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |