New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_pgi = 2630917120 (1.040)16 (0.150) 15/260 10.7 12.6% intergenic (+52/+41) yfgI/guaA nalidixic acid resistance protein, putative periplasmic protein/GMP synthetase (glutamine aminotransferase)
?NC_000913_3_pae_pgi = 2630921 113 (1.070)intergenic (+56/+37) yfgI/guaA nalidixic acid resistance protein, putative periplasmic protein/GMP synthetase (glutamine aminotransferase)
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 124 total aligned reads displayed.

AGCTGACGCCAACAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAGGAAATCG  >  NC_000913_3_pae_pgi/2630769‑2631066
                                                                                                                                                     |                                                                                                                                                     
aGCTGACGCCAACAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTg‑ta                                                                                                                                                      <  4:243968/150‑1 (MQ=255)
  cTGACGCCAACAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTg‑tagt                                                                                                                                                    <  1:80881/150‑1 (MQ=255)
       gCCAACAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACag                                                                                                                                               >  2:1144341/1‑150 (MQ=255)
           aCAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAggg                                                                                                                                           >  2:1227754/1‑150 (MQ=255)
             aGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGtt                                                                                                                                         >  1:9192/1‑150 (MQ=255)
              gAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TTACTACAGAGGGttt                                                                                                                                        <  1:189582/150‑1 (MQ=255)
              gAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGttt                                                                                                                                        <  1:95124/150‑1 (MQ=255)
               gaaTAGGACTGAGGGCGGTCTCGGTCGGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAATTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TTACTACAGAGGGtttt                                                                                                                                       <  2:1059632/149‑1 (MQ=255)
                aaTATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTg                                                                                                                                      <  1:1101250/150‑1 (MQ=255)
                  tatGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGtt                                                                                                                                    <  2:1060991/150‑1 (MQ=255)
                   atGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGttc                                                                                                                                   <  3:212862/150‑1 (MQ=255)
                     gACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGttcat                                                                                                                                 <  2:20609/150‑1 (MQ=255)
                     gACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGttcat                                                                                                                                 >  4:595456/1‑150 (MQ=255)
                     gACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGttcat                                                                                                                                 >  1:857419/1‑150 (MQ=255)
                      aCTGAAGGCGGTCGCTATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTg                                                                                                                                      <  3:436437/144‑1 (MQ=255)
                       cTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTaa                                                                                                                                                  >  3:632184/1‑131 (MQ=255)
                       cTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTaa                                                                                                                                                  <  4:632184/131‑1 (MQ=255)
                        tGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTg‑tta                                                                                                                                                     >  3:609505/1‑125 (MQ=255)
                        tGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTg‑tta                                                                                                                                                     <  4:609505/127‑3 (MQ=255)
                        tGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGttcattca                                                                                                                              >  3:18480/1‑150 (MQ=255)
                        tGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGttcattca                                                                                                                              >  3:360233/1‑150 (MQ=255)
                         gAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTtcattcat                                                                                                                             <  1:765056/150‑1 (MQ=255)
                          aaGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGTACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTCGAAGATAAAAAACCCTCTG‑TAGTAACAGTGGGTTTTGTTCATTCATa                                                                                                                            <  2:759667/150‑1 (MQ=255)
                          aaGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATa                                                                                                                            <  2:12672/150‑1 (MQ=255)
                               ggTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCa                                                                                                                       <  2:154162/150‑1 (MQ=255)
                                gTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAg                                                                                                                      >  2:882017/1‑150 (MQ=255)
                                gTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAg                                                                                                                      >  1:181239/1‑150 (MQ=255)
                                   gcgATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGt                                                                                                                                     <  2:323462/132‑1 (MQ=255)
                                   gcgATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGt                                                                                                                                     >  1:323462/1‑132 (MQ=255)
                                      aTCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCaa                                                                                                                >  3:280985/1‑150 (MQ=255)
                                      aTCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCaa                                                                                                                >  3:280950/1‑150 (MQ=255)
                                         tgatgaAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATc                                                                                                             <  3:534121/150‑1 (MQ=255)
                                          gatgaAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCa                                                                                                            >  2:5527/1‑150 (MQ=255)
                                             gaAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCAtcc                                                                                                         <  1:736915/150‑3 (MQ=255)
                                             gaAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTc                                                                                                         <  1:396143/150‑1 (MQ=255)
                                              aaaaGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTcc                                                                                                        >  4:3235/1‑150 (MQ=255)
                                               aaaGCGTGGGCAAAGCAGAAGAGAACACATCGGACAGCTGGTTTAATCAATCGCTGCTCGAAACTTCAACCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTccc                                                                                                       >  2:1224434/1‑150 (MQ=255)
                                                aaGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCa                                                                                                      <  1:19892/150‑1 (MQ=255)
                                                aaGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCa                                                                                                      >  2:1002111/1‑150 (MQ=255)
                                                   cGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTc                                                                                                   <  3:928/150‑1 (MQ=255)
                                                      gggCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATGATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCCAATCATTCCCACTCAAt                                                                                                <  2:949228/150‑1 (MQ=255)
                                                      gggCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCact                                                                                                <  4:422979/150‑3 (MQ=255)
                                                       ggCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATg                                                                                               >  1:988178/1‑150 (MQ=255)
                                                         cAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCaa                                                                                                                >  4:711562/1‑131 (MQ=255)
                                                          aaaGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTccc                                                                                                       <  1:1192721/139‑1 (MQ=255)
                                                              cAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTg                                                                                        >  3:626843/1‑150 (MQ=255)
                                                                  agagAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAAGCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTggcgg                                                                                    <  4:644190/150‑1 (MQ=255)
                                                                   gagaACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTggcggc                                                                                   >  2:843057/1‑150 (MQ=255)
                                                                       aCAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGc                                                                               <  4:185561/150‑1 (MQ=255)
                                                                       aCAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATGCACACTCAATGGTAGCTGGCGGCTTGc                                                                               >  2:722588/1‑150 (MQ=255)
                                                                        cAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGcc                                                                              <  2:945002/150‑1 (MQ=255)
                                                                          aaTCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTc                                                                                                   <  2:1210652/127‑1 (MQ=255)
                                                                          aaTCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTc                                                                                                   >  1:1210652/1‑127 (MQ=255)
                                                                               gACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATg                                                                       >  3:700360/1‑150 (MQ=255)
                                                                                aCAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGt                                                                      >  1:606425/1‑150 (MQ=255)
                                                                                 cAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTc                                                                     <  1:1227754/150‑1 (MQ=255)
                                                                                   gCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCAt                                                                   <  1:927005/150‑1 (MQ=255)
                                                                                     tGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATac                                                                 <  4:236551/150‑1 (MQ=255)
                                                                                      ggTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATaca                                                                >  2:784164/1‑150 (MQ=255)
                                                                                        tttAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATAcacc                                                              >  1:110700/1‑150 (MQ=255)
                                                                                         ttaattaaTCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGATTGACGCTAATGTCTTAcgccg                                                             <  2:988178/150‑2 (MQ=255)
                                                                                            attaatCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCAcgc                                                          >  3:517703/1‑150 (MQ=255)
                                                                                            attaatCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCAcgc                                                          >  4:371652/1‑150 (MQ=255)
                                                                                            attaatCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCAcgc                                                          >  1:1070919/1‑150 (MQ=255)
                                                                                             ttaatCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGCTAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCAcgcg                                                         >  3:175796/1‑150 (MQ=255)
                                                                                             ttaatCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTc                                                                                                         <  1:364862/102‑1 (MQ=255)
                                                                                             ttaatCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCAcgcg                                                         >  3:15610/1‑150 (MQ=255)
                                                                                             ttaatCGATGTTAGTAACTTCAATCCTATAATTATTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTc                                                                                                         >  2:364862/1‑102 (MQ=255)
                                                                                                atCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGa                                                      >  3:102647/1‑150 (MQ=255)
                                                                                                atCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGa                                                      >  3:97254/1‑150 (MQ=255)
                                                                                                 tCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGaa                                                     <  2:27674/150‑1 (MQ=255)
                                                                                                         aGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGtt                                             >  2:157266/1‑150 (MQ=255)
                                                                                                           tAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCa                                           <  1:1194098/150‑1 (MQ=255)
                                                                                                            aaCTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCAc                                          <  4:626843/150‑1 (MQ=255)
                                                                                                                  aaTCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCAtt                                    >  3:45463/1‑150 (MQ=255)
                                                                                                                    tCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGa                                  >  4:138245/1‑150 (MQ=255)
                                                                                                                    tCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGa                                  >  2:188992/1‑150 (MQ=255)
                                                                                                                     ccTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGAt                                 <  3:427991/150‑1 (MQ=255)
                                                                                                                           aTTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCg                           <  2:606425/150‑1 (MQ=255)
                                                                                                                           aTTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCg                           >  4:245946/1‑150 (MQ=255)
                                                                                                                            ttCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCgg                          <  3:138245/150‑1 (MQ=255)
                                                                                                                               ttGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTg                       <  3:245946/150‑1 (MQ=255)
                                                                                                                               ttGAAGATAAAAAACCCTCTG‑TAGTAACAGAGAGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTg                       >  1:590080/1‑150 (MQ=255)
                                                                                                                                 gAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTggcgg                                                                                    <  2:240116/87‑1 (MQ=255)
                                                                                                                                 gAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTggcgg                                                                                    >  1:240116/1‑87 (MQ=255)
                                                                                                                                  aaGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGaa                    >  1:842073/1‑150 (MQ=255)
                                                                                                                                    gATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCt                                                                           >  2:905464/1‑93 (MQ=255)
                                                                                                                                    gATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCt                                                                           <  1:905464/93‑1 (MQ=255)
                                                                                                                                    gATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAAc                  >  4:313994/1‑150 (MQ=255)
                                                                                                                                    gATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAAc                  >  1:559727/1‑150 (MQ=255)
                                                                                                                                          aaaCCCTCTGTTACT‑ACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGAcc            >  1:1002334/1‑150 (MQ=255)
                                                                                                                                            aCCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGa          <  4:15610/150‑1 (MQ=255)
                                                                                                                                             cccTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAg         <  2:696374/150‑1 (MQ=255)
                                                                                                                                             cccTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAg         <  3:3235/150‑1 (MQ=255)
                                                                                                                                              ccTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAgg        <  4:736089/150‑1 (MQ=255)
                                                                                                                                              ccTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAgg        >  3:418404/1‑150 (MQ=255)
                                                                                                                                               ctctG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAGGa       <  3:646624/150‑1 (MQ=255)
                                                                                                                                                tctG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAGGaa      >  1:144368/1‑150 (MQ=255)
                                                                                                                                                tctG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAGGaa      >  1:1126436/1‑150 (MQ=255)
                                                                                                                                                     tagtaACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAGGAAATCg  >  4:669818/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
AGCTGACGCCAACAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAGGAAATCG  >  NC_000913_3_pae_pgi/2630769‑2631066

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.