New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_pgi = 2630917120 (1.040)16 (0.150) 15/260 10.7 12.6% intergenic (+52/+41) yfgI/guaA nalidixic acid resistance protein, putative periplasmic protein/GMP synthetase (glutamine aminotransferase)
?NC_000913_3_pae_pgi = 2630921 113 (1.070)intergenic (+56/+37) yfgI/guaA nalidixic acid resistance protein, putative periplasmic protein/GMP synthetase (glutamine aminotransferase)
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 123 total aligned reads displayed.

GCCAACAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAGGAAATCGTACG  >  NC_000913_3_pae_pgi/2630776‑2631070
                                                                                                                                                  |                                                                                                                                                     
gCCAACAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACag                                                                                                                                                   >  2:1144341/1‑150 (MQ=255)
   aaCAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAgg                                                                                                                                                <  1:414684/150‑1 (MQ=255)
    aCAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAggg                                                                                                                                               >  2:1227754/1‑150 (MQ=255)
      aGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGtt                                                                                                                                             >  1:9192/1‑150 (MQ=255)
       gAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TTACTACAGAGGGttt                                                                                                                                            <  1:189582/150‑1 (MQ=255)
       gAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGttt                                                                                                                                            <  1:95124/150‑1 (MQ=255)
         aaTATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTg                                                                                                                                          <  1:1101250/150‑1 (MQ=255)
           tatGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGtt                                                                                                                                        <  2:1060991/150‑1 (MQ=255)
            atGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGttc                                                                                                                                       <  3:212862/150‑1 (MQ=255)
              gACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGttcat                                                                                                                                     >  1:857419/1‑150 (MQ=255)
              gACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGttcat                                                                                                                                     <  2:20609/150‑1 (MQ=255)
              gACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGttcat                                                                                                                                     >  4:595456/1‑150 (MQ=255)
               aCTGAAGGCGGTCGCTATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTg                                                                                                                                          <  3:436437/144‑1 (MQ=255)
               aCTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTg                                                                                                                                          >  4:436437/1‑144 (MQ=255)
                cTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTaa                                                                                                                                                      <  4:632184/131‑1 (MQ=255)
                 tGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGttcattca                                                                                                                                  >  3:360233/1‑150 (MQ=255)
                 tGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGttcattca                                                                                                                                  >  3:18480/1‑150 (MQ=255)
                 tGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGttcattca                                                                                                                                  >  1:746898/1‑150 (MQ=255)
                  gAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTtcattcat                                                                                                                                 >  4:164781/1‑150 (MQ=255)
                   aaGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGTACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTCGAAGATAAAAAACCCTCTG‑TAGTAACAGTGGGTTTTGTTCATTCATa                                                                                                                                <  2:759667/150‑1 (MQ=255)
                   aaGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATa                                                                                                                                <  2:12672/150‑1 (MQ=255)
                   aaGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATa                                                                                                                                >  3:106561/1‑150 (MQ=255)
                   aaGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATa                                                                                                                                >  3:185561/1‑150 (MQ=255)
                      gCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTg                                                                                                                             <  2:207742/150‑1 (MQ=255)
                        ggTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCa                                                                                                                           <  2:154162/150‑1 (MQ=255)
                         gTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAg                                                                                                                          >  2:882017/1‑150 (MQ=255)
                         gTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAg                                                                                                                          >  1:181239/1‑150 (MQ=255)
                            gcgATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGt                                                                                                                                         >  1:323462/1‑132 (MQ=255)
                             cgATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTc                                                                                                                      <  2:746898/150‑1 (MQ=255)
                               aTCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCaa                                                                                                                    >  3:280985/1‑150 (MQ=255)
                                tCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCaaa                                                                                                                   <  3:554493/150‑1 (MQ=255)
                                  tgatgaAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATc                                                                                                                 <  3:534121/150‑1 (MQ=255)
                                   gatgaAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCa                                                                                                                >  2:5527/1‑150 (MQ=255)
                                      gaAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCAtcc                                                                                                             <  1:736915/150‑3 (MQ=255)
                                      gaAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTc                                                                                                             <  1:396143/150‑1 (MQ=255)
                                       aaaaGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTcc                                                                                                            >  4:3235/1‑150 (MQ=255)
                                         aaGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCa                                                                                                          >  2:1002111/1‑150 (MQ=255)
                                         aaGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCa                                                                                                          <  1:19892/150‑1 (MQ=255)
                                          aGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCAc                                                                                                         <  1:895186/150‑1 (MQ=255)
                                            cGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTc                                                                                                       <  3:928/150‑1 (MQ=255)
                                                ggCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATg                                                                                                   >  1:988178/1‑150 (MQ=255)
                                                  cAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCaa                                                                                                                    <  3:711562/131‑1 (MQ=255)
                                                  cAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCaa                                                                                                                    >  4:711562/1‑131 (MQ=255)
                                                   aaaGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTccc                                                                                                           >  2:1192721/1‑139 (MQ=255)
                                                   aaaGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTccc                                                                                                           <  1:1192721/139‑1 (MQ=255)
                                                       cAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTg                                                                                            >  3:626843/1‑150 (MQ=255)
                                                           agagAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTggcgg                                                                                        <  3:431244/150‑1 (MQ=255)
                                                           agagAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAAGCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTggcgg                                                                                        <  4:644190/150‑1 (MQ=255)
                                                            gagaACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTggcggc                                                                                       >  2:843057/1‑150 (MQ=255)
                                                               aaCAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTg                                                                                    >  1:225334/1‑150 (MQ=255)
                                                                aCAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGc                                                                                   <  4:185561/150‑1 (MQ=255)
                                                                aCAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATGCACACTCAATGGTAGCTGGCGGCTTGc                                                                                   >  2:722588/1‑150 (MQ=255)
                                                                 cAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGcc                                                                                  <  4:286362/150‑1 (MQ=255)
                                                                 cAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGcc                                                                                  <  2:945002/150‑1 (MQ=255)
                                                                   aaTCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTc                                                                                                       >  1:1210652/1‑127 (MQ=255)
                                                                   aaTCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTc                                                                                                       <  2:1210652/127‑1 (MQ=255)
                                                                        gACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATg                                                                           >  3:700360/1‑150 (MQ=255)
                                                                         aCAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGt                                                                          >  1:606425/1‑150 (MQ=255)
                                                                          cAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTc                                                                         <  1:1227754/150‑1 (MQ=255)
                                                                               ggTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATaca                                                                    >  2:784164/1‑150 (MQ=255)
                                                                                 tttAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATAcacc                                                                  >  1:110700/1‑150 (MQ=255)
                                                                                  ttaattaaTCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGATTGACGCTAATGTCTTAcgccg                                                                 <  2:988178/150‑2 (MQ=255)
                                                                                     attaatCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCAcgc                                                              >  4:371652/1‑150 (MQ=255)
                                                                                     attaatCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCAcgc                                                              >  1:1070919/1‑150 (MQ=255)
                                                                                     attaatCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCAcgc                                                              >  1:996881/1‑150 (MQ=255)
                                                                                      ttaatCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGCTAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCAcgcg                                                             >  3:175796/1‑150 (MQ=255)
                                                                                      ttaatCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTc                                                                                                             <  1:364862/102‑1 (MQ=255)
                                                                                      ttaatCGATGTTAGTAACTTCAATCCTATAATTATTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTc                                                                                                             >  2:364862/1‑102 (MQ=255)
                                                                                         atCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGa                                                          >  3:102647/1‑150 (MQ=255)
                                                                                          tCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGaa                                                         <  2:27674/150‑1 (MQ=255)
                                                                                                ttAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCg                                                   <  2:135670/150‑1 (MQ=255)
                                                                                                  aGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGtt                                                 >  2:157266/1‑150 (MQ=255)
                                                                                                    tAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCa                                               <  1:1194098/150‑1 (MQ=255)
                                                                                                     aaCTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCAc                                              <  4:626843/150‑1 (MQ=255)
                                                                                                       cTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGCCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACtt                                            >  2:376411/1‑150 (MQ=255)
                                                                                                           aaTCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCAtt                                        <  2:9192/150‑1 (MQ=255)
                                                                                                           aaTCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCAtt                                        >  3:45463/1‑150 (MQ=255)
                                                                                                             tCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGa                                      >  4:138245/1‑150 (MQ=255)
                                                                                                              ccTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGAt                                     <  3:427991/150‑1 (MQ=255)
                                                                                                                 ataATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAAt                                  <  3:313817/150‑1 (MQ=255)
                                                                                                                    aTTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCg                               >  4:245946/1‑150 (MQ=255)
                                                                                                                    aTTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCg                               <  2:606425/150‑1 (MQ=255)
                                                                                                                     ttCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCgg                              <  3:138245/150‑1 (MQ=255)
                                                                                                                        ttGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTg                           <  3:245946/150‑1 (MQ=255)
                                                                                                                        ttGAAGATAAAAAACCCTCTG‑TAGTAACAGAGAGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTg                           >  1:590080/1‑150 (MQ=255)
                                                                                                                          gAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTggcgg                                                                                        <  2:240116/87‑1 (MQ=255)
                                                                                                                           aaGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGaa                        >  1:842073/1‑150 (MQ=255)
                                                                                                                             gATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCt                                                                               <  1:905464/93‑1 (MQ=255)
                                                                                                                             gATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCt                                                                               >  2:905464/1‑93 (MQ=255)
                                                                                                                             gATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAAc                      >  4:313994/1‑150 (MQ=255)
                                                                                                                                   aaaCCCTCTGTTACT‑ACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGAcc                >  1:1002334/1‑150 (MQ=255)
                                                                                                                                     aCCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGa              <  4:15610/150‑1 (MQ=255)
                                                                                                                                      cccTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAg             <  3:3235/150‑1 (MQ=255)
                                                                                                                                       ccTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAgg            <  4:736089/150‑1 (MQ=255)
                                                                                                                                        ctctG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAGGa           <  3:646624/150‑1 (MQ=255)
                                                                                                                                         tctG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAGGaa          >  1:144368/1‑150 (MQ=255)
                                                                                                                                         tctG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAGGaa          >  1:1126436/1‑150 (MQ=255)
                                                                                                                                              tagtaACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAGGAAATCg      >  4:669818/1‑150 (MQ=255)
                                                                                                                                                 taACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAGGAAATCGTAc   >  3:544843/1‑150 (MQ=255)
                                                                                                                                                  aaCAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAGGAAATCGTACg  <  3:595456/150‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                     
GCCAACAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAGGAAATCGTACG  >  NC_000913_3_pae_pgi/2630776‑2631070

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.