BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_pgi	4218568 =	84 (1.210)	907 (13.870)	215/246	0.0	92.0%	intergenic (+155/‑28)	aceA/aceK	isocitrate lyase/isocitrate dehydrogenase kinase/phosphatase
*	?	NC_000913_3_pae_pgi	= 4253290	NA (NA)	907 (13.870)	215/246	0.0	92.0%	noncoding (130/130 nt)	RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site	RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site

Only 100 of 1215 total aligned reads displayed.

ACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTgccggatgcggcg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_pae_pgi/4218723‑4218568

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agagaattGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCATCAGAAATGCCAGTAACTC  <  NC_000913_3_pae_pgi/4253290‑4253130

  AGCAGGCCAGTCGGCTTGCTCGAAACGCTGCTGCGGCCAGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAACTGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGA                                                                                                                                                                        <  2:754800/149‑1

   GCATGCCAGTCGGCCTGTTCGAAACGCCGCTGCCCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCCAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGACCAGAG                                                                                                                                                                       >  2:1106473/1‑149

     ATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAA                                                                                                                                                                     >  1:117254/1‑149

      TGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAA                                                                                                                                                                     <  2:623210/149‑1

        CCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTG                                                                                                                                                                  >  2:579006/1‑149

         CAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATAGTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGGATTGC                                                                                                                                                                 <  2:1212117/149‑1

         CAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGC                                                                                                                                                                 >  2:723869/1‑149

            TCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGG                                                                                                                                                              >  1:990370/1‑149

                tCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATGGATAGTTCCCGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGC                                                                                                                                                          <  1:519166/148‑1

                        AAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAA                                                                                                                                                  >  2:206681/1‑149

                            GCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGAATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCC                                                                                                                                              >  2:336347/1‑149

                            GCTGCGGCGCACCGAGGGTTCCTTCTAGGAATCCAGCATACTGAGCATCGAAGCCGTGC‑AAAATGGTTTGAGCAAGCAATAATTCCAGGCCACGCCGCATTTAGCGTCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCC                                                                                                                                              <  1:1053692/149‑1

                                 TGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATC                                                                                                                                         >  1:1084057/1‑149

                                   ccCACCGGAGGTCACTTCGAAGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCGGCGTCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCG                                                                                                                                       <  1:311363/147‑1

                                   CGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCG                                                                                                                                       <  1:718350/149‑1

                                     CACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                                                                                     <  2:844528/149‑1

                                      ACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCC                                                                                                                                    >  2:510242/1‑149

                                      ACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCC                                                                                                                                    >  1:384976/1‑149

                                         GGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTC                                                                                                                                 <  2:1159153/149‑1

                                           AGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCA                                                                                                                               <  2:865730/149‑1

                                           AGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCA                                                                                                                               <  2:105367/149‑1

                                             GTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATA                                                                                                                             >  1:1298664/1‑149

                                              TCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAA                                                                                                                            >  1:53600/1‑149

                                               CACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAAT                                                                                                                           <  2:947048/149‑1

                                                ACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCAGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATC                                                                                                                          <  1:872841/149‑1

                                                 CTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCT                                                                                                                         <  1:1036688/149‑1

                                                  TTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTG                                                                                                                        <  1:974849/149‑1

                                                  TTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTG                                                                                                                        >  1:150027/1‑149

                                                     GAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAA                                                                                                                     >  1:579016/1‑149

                                                     GAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGC                                                                                                                       <  1:673470/147‑1

                                                      AGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAA                                                                                                                    <  1:459783/149‑1

                                                      AGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAA                                                                                                                    <  1:47790/149‑1

                                                        GAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATT                                                                                                                  >  2:697196/1‑149

                                                           TCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAA                                                                                                               <  1:75399/149‑1

                                                           TCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCT                                                                                                                                             <  2:826410/119‑1

                                                            ctACCATACTGAGCATCGAAGCCTTGC‑AAAATGCTTTGAGCAATCAATAATTCCAGTCCACGCTTCATTTATCTCTCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAAT                                                                                                              <  1:29096/147‑1

                                                                  TACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTG                                                                                                        >  1:1104847/1‑149

                                                                     TGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTCTCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGc                                                                                                     >  1:56693/1‑148

                                                                     TGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGA                                                                                                     >  1:1154269/1‑149

                                                                     TGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGA                                                                                                     <  2:459303/149‑1

                                                                      GAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGAT                                                                                                    >  1:8938/1‑149

                                                                      GAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGAT                                                                                                    <  1:438498/149‑1

                                                                           TCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTT                                                                                               <  2:962067/149‑1

                                                                           TCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATGCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTT                                                                                               <  1:913158/149‑1

                                                                            CGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTG                                                                                              <  1:639295/149‑1

                                                                              AAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTG                                                                                            >  1:113114/1‑149

                                                                              AAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTG                                                                                            <  2:1278618/149‑1

                                                                               atCCTTGC‑AAAATGGTTTGAGCGATCAATAATTCAAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGT                                                                                           <  2:364330/147‑1

                                                                               AGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTCGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGT                                                                                           >  1:596019/1‑149

                                                                                 CCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCACATTCAATGACTTGCGCAGTGTTGTGTAG                                                                                         >  2:526761/1‑149

                                                                                  CTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGG                                                                                        >  1:783146/1‑149

                                                                                  CTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAA                                                                                                               <  1:65596/126‑1

                                                                                   TTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAA                                                                                                               <  1:732214/125‑1

                                                                                   TTGC‑AAAATGGTTTGAGCAATCAATAAGTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGC                                                                                       <  1:560242/149‑1

                                                                                     GC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCT                                                                                     <  2:275428/149‑1

                                                                                     GC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCT                                                                                     <  2:171753/149‑1

                                                                                     GC‑AAAAGCGGTTGAGCAATCAATAAGTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGAGGCGAAAACGCTTTATCCGGACTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCT                                                                                     <  2:29519/149‑1

                                                                                        AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGA                                                                                   >  1:163247/1‑149

                                                                                            TGGTTGGAGCGATCAATAATTCCAGGCGACGCGGCATTTAGCGCTCTCATCAGGAGCAGAGAATTGGCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATACTCTGCAAATTCAGTAAATTGCGATGTGTTGTGTAGGCCTGAGAAG                                                                               <  2:309937/149‑1

                                                                                             GGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGC                                                                              <  2:15036/149‑1

                                                                                               TTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGC                                                                            >  1:833792/1‑149

                                                                                               TTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGC                                                                            >  1:808318/1‑149

                                                                                                TTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCC                                                                           <  1:1022113/149‑1

                                                                                                  GAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGC                                                                         <  1:228403/149‑1

                                                                                                      AATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCAT                                                                     <  1:944574/149‑1

                                                                                                      AATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCACCAGGGGCAGAGAAGTGCCGGATGCGGCGAAACCGCCTTCCTCGGTCGTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCAT                                                                     <  2:661760/149‑1

                                                                                                       ATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATC                                                                    >  1:1012219/1‑149

                                                                                                        TCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCA                                                                   >  2:895379/1‑149

                                                                                                         CAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAG                                                                  <  2:48274/149‑1

                                                                                                          AATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCG                                                                                                      >  2:1235965/1‑112

                                                                                                           ATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGC                                                                <  1:1199181/149‑1

                                                                                                             AATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAA                                                              <  1:1251858/149‑1

                                                                                                             AATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGACAAGTGCCGAATGTGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGGGTTGTGTAGGCCTGGGAAGCGCCGCGCATCAGGCAA                                                              <  2:1032699/149‑1

                                                                                                                     GCCACCCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAG                                                      >  2:1142768/1‑149

                                                                                                                            gttATTTAGTGCACTCATCAGGAGCATAGAATTGCAGAATGCTGCAAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCATGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCG                                               <  1:34085/146‑1

                                                                                                                              CATTTAGCGCCCTCATCTCGAACAGGGAATTTCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGA                                             <  2:929062/149‑1

                                                                                                                              CATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGA                                                                                   >  1:1000125/1‑111

                                                                                                                               ATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGAT                                            >  2:118732/1‑149

                                                                                                                                 TTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGA                                          <  1:258824/149‑1

                                                                                                                                 TTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTT                                                                                               >  2:1013793/1‑96

                                                                                                                                        CCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCG                                   >  1:1220723/1‑149

                                                                                                                                           CATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCT                                <  2:678701/149‑1

                                                                                                                                            ATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTT                               >  1:1271644/1‑149

                                                                                                                                             TCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTT                              >  2:421561/1‑149

                                                                                                                                             TCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTT                              >  2:793944/1‑149

                                                                                                                                             TCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCAGGCTTT                              >  1:189137/1‑149

                                                                                                                                                  AGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTAC                         <  1:411499/149‑1

                                                                                                                                                    CAGATAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGGGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTcttctgg                       <  2:55457/149‑8

                                                                                                                                                    CAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACAT                       >  2:245580/1‑149

                                                                                                                                                     AGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCATTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATC                      >  2:1085148/1‑149

                                                                                                                                                      GAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAGACCGGATGATCATCCGGCTTTTTTACATCA                     >  1:322348/1‑149

                                                                                                                                                        GAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCATC                   <  1:697771/149‑1

                                                                                                                                                         AATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCT                                                                                     <  2:406628/82‑1

                                                                                                                                                             GCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCATCAGAAA              >  2:1309604/1‑149

                                                                                                                                                              CCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCATCAGAAAT             >  1:499583/1‑149

                                                                                                                                                              CCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCATCAGAAAT             <  1:621461/149‑1

                                                                                                                                                                      GGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCATCAGAAATGCCAGTAA     <  1:358714/149‑1

                                                                                                                                                                      GGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCATCAGAAATGCCAGTAA     >  1:854020/1‑149

                                                                                                                                                                      GGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCC                                                <  2:979026/106‑1

                                                                                                                                                                       GCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCATCAGAAATGCCAGTAc     >  2:599303/1‑147

ACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGC‑AAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTgccggatgcggcg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_pae_pgi/4218723‑4218568

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agagaattGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCATCAGAAATGCCAGTAACTC  <  NC_000913_3_pae_pgi/4253290‑4253130

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.