| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_pgi | 4218568 = | 84 (1.210) | 907 (13.870) | 215/246 | 0.0 | 92.0% | intergenic (+155/‑28) | aceA/aceK | isocitrate lyase/isocitrate dehydrogenase kinase/phosphatase |
| ? | NC_000913_3_pae_pgi | = 4253290 | NA (NA) | noncoding (130/130 nt) | RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | |||||
Only 100 of 1165 total aligned reads displayed.
CAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGC > NC_000913_3_pae_pgi/4218421‑4218716 | tctgatgatgtaaaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcaa > 1:667523‑M1/148‑149 (MQ=255) tgatgatgtaaaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAAtt < 1:614093‑M1/4‑1 (MQ=255) gatgatgtaaaaaagccggatgatcatccggctttcttctgggttgcctgatgagcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccacatccggcaatgc < 2:622972‑M1/5‑3 (MQ=255) tgagttaaaaaagccgcatgatcatccggctttcttctgggttgcctgttgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaagttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATtctc > 1:3207‑M1/143‑149 (MQ=255) gatgtaaaaaagccggattatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTctct > 2:313079‑M1/142‑149 (MQ=255) gatgtaaaaaagccggatgatcatccggctttcttctgggttgcctgatgcccggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTctct < 2:853091‑M1/8‑1 (MQ=255) gtaaaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCt < 1:1209720‑M1/11‑1 (MQ=255) aaagcctgatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCtga > 1:189137‑M1/134‑149 (MQ=255) gccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCtgatga < 1:402889‑M1/19‑1 (MQ=255) gccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCtgatga < 1:510242‑M1/19‑1 (MQ=255) cggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggccttcgcaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAgg < 1:1035140‑M1/21‑1 (MQ=255) cggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAgg < 2:550333‑M1/21‑1 (MQ=255) atgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGgcg < 2:1289082‑M1/24‑1 (MQ=255) atcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTa < 2:186609‑M1/27‑1 (MQ=255) atcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTa > 1:216978‑M1/123‑149 (MQ=255) atccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAAt > 2:595830‑M1/120‑149 (MQ=255) tccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTACATg < 1:1084977‑M1/31‑1 (MQ=255) cggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGcc < 2:659492‑M1/33‑1 (MQ=255) ggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCtgat > 2:1036845‑M1/116‑132 (MQ=255) ggttttttctaggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCcgc > 2:136358‑M1/115‑149 (MQ=255) ctttcttctgggttgcctgatgcgcggcgattatcacgcaggcgcaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCcgcg < 1:976225‑M1/36‑1 (MQ=255) ttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTg < 2:1114686‑M1/38‑1 (MQ=255) ttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTg > 1:1019354‑M1/112‑149 (MQ=255) cgccgcATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTg < 2:1251307/149‑1 (MQ=255) ttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCGAAATGCCGCGTGGcc < 2:372198‑M1/41‑1 (MQ=255) ttcggggttgccggatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGcc > 1:731780‑M1/109‑149 (MQ=255) gggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGa > 2:347330‑M1/105‑149 (MQ=255) gggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGa < 1:565162‑M1/45‑1 (MQ=255) gcctgatgcgcggcgcttttccggcctacacaacccatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAattat > 1:651541‑M1/100‑149 (MQ=255) cctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCt > 2:691177‑M1/99‑140 (MQ=255) ctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattg < 2:52428‑M1/52‑1 (MQ=255) gatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattgat > 1:758835‑M1/96‑149 (MQ=255) gatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattgat > 1:1012219‑M1/96‑149 (MQ=255) atgcgcggcggttctcagtcctagacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCATGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattgatt > 2:450630‑M1/95‑149 (MQ=255) atgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattgatt > 1:149697‑M1/95‑149 (MQ=255) gcgcggggcttctcaggcatacacaaaacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAAGTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGc > 1:125291‑M1/93‑149 (MQ=255) cgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCt < 2:1213945‑M1/58‑1 (MQ=255) gcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTc < 1:710467‑M1/59‑1 (MQ=255) gcggcacttctcaggcctacacaacacgtcacaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCAGGACTTATTGATTGCTc < 1:1279338‑M1/59‑1 (MQ=255) gcgcttctcatgcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCaaa > 1:131071‑M1/88‑149 (MQ=255) gcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCaaa < 2:1060027‑M1/62‑1 (MQ=255) cttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCtgat < 2:958034‑M1/17‑1 (MQ=255) ctcaggcctaaacaacacagcgcaatttattgaatttgcagagtatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAGCCAttt > 2:158350‑M1/82‑149 (MQ=255) tcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATg < 2:1000125‑M1/31‑1 (MQ=255) tcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATg > 1:1000125‑M1/81‑111 (MQ=255) tcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCAtttt > 1:163247‑M1/81‑149 (MQ=255) aggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAAtt < 2:406628‑M1/4‑1 (MQ=255) gCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCa < 1:1233524/149‑1 (MQ=255) gcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTg > 1:421420‑M1/77‑119 (MQ=255) gcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTg < 2:421420‑M1/43‑1 (MQ=255) cGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCaa < 1:493702/149‑1 (MQ=255) cctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAg > 1:90316‑M1/76‑149 (MQ=255) acacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGCTTGCTCAAAGCATTTTGCAAGGCt > 1:1137167‑M1/73‑149 (MQ=255) aacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCtgatga < 1:572569‑M1/19‑1 (MQ=255) aacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGa < 1:956355‑M1/81‑1 (MQ=255) aacacaccgccattgattgaagttgcagattatggaagggcggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGa > 1:348020‑M1/69‑149 (MQ=255) acacctcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGAt > 1:812000‑M1/68‑149 (MQ=255) cacatcgcaatttattgaatttgcatattatcgaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGCCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATg > 1:587257‑M1/67‑149 (MQ=255) acatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGc < 1:527720‑M1/84‑1 (MQ=255) tcgcaatttattgaatttgcagattatgtaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCa > 2:1016543‑M1/63‑149 (MQ=255) ttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGt > 1:931560‑M1/56‑149 (MQ=255) tattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTc > 1:837075‑M1/55‑149 (MQ=255) ttgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGa < 1:54898‑M1/97‑1 (MQ=255) tgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGAt < 1:691524‑M1/98‑1 (MQ=255) gaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGa < 2:276406‑M1/97‑1 (MQ=255) tttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCt > 2:836239‑M1/48‑149 (MQ=255) ttgacaaaCGTTTGCTGGATTAGGCGTTTACGCCGCATCCGGTAATTCTCTTCTCCTGATGCGGTCGCTAAATGCCGCGTGGCCTGGAATTATTGATTTTTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTTGATTCCTCGaa < 2:813183/143‑1 (MQ=255) cagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGaa > 1:787339‑M1/44‑149 (MQ=255) cagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGaa > 2:940506‑M1/44‑149 (MQ=255) cagattatggaacgccggataaggcgttttccccgcatccggcAATTATCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCCGGAAGTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGaa > 1:468491‑M1/44‑149 (MQ=255) aagattagggaaggccggataaggggttttcgccgcatccggcAATTCTCTGCTCTTGATGATGGCGCTAAATGCCGCGTGTCCTGGATTTATTGATTGCTCAAACCATTTTGCAAGGCTTCGACGCTCAGTATGGTCGATTCCTCGaa > 2:775604‑M1/44‑149 (MQ=255) agattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAg > 1:332821‑M1/43‑149 (MQ=255) agattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAg < 2:974694‑M1/107‑1 (MQ=255) gattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGAAGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGAGTCCTCGAAGt < 2:917489‑M1/108‑1 (MQ=255) ttatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGa > 2:1148610‑M1/40‑149 (MQ=255) ttatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGa > 1:1106125‑M1/40‑149 (MQ=255) tggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGt > 1:281376‑M1/37‑144 (MQ=255) gaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTcc < 2:1200592‑M1/115‑1 (MQ=255) aGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTaaa < 1:37697/61‑1 (MQ=255) aGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCgg > 2:246603/1‑149 (MQ=255) ggccggatacggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCAGTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGt > 1:253400‑M1/32‑149 (MQ=255) ggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGt > 2:510242‑M1/32‑149 (MQ=255) gCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTc < 2:296543/130‑1 (MQ=255) taaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCgcagc > 1:1176661‑M1/25‑149 (MQ=255) tAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCgcagc > 2:749640/1‑149 (MQ=255) gttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGt > 1:1048348‑M1/19‑112 (MQ=255) ggtttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCGCAGTATTGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGtt > 2:879174‑M1/19‑149 (MQ=255) ttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGttt > 2:206681‑M1/18‑149 (MQ=255) tttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTc > 2:676870‑M1/17‑149 (MQ=255) tttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGAGATTGATTATTTATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTc > 1:304919‑M1/17‑149 (MQ=255) cgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGaa > 1:891912‑M1/14‑149 (MQ=255) ccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACa < 2:1089440‑M1/138‑1 (MQ=255) ccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACa < 1:441406‑M1/138‑1 (MQ=255) cgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAg > 2:478937‑M1/11‑149 (MQ=255) catccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGc > 2:573351‑M1/9‑149 (MQ=255) atccggcAATCCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGcc > 1:1156456‑M1/8‑149 (MQ=255) cggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGccgcc < 2:717211‑M1/145‑3 (MQ=255) cggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGATTAGAAACGCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACaggcctac < 1:637513‑M1/145‑4 (MQ=255) cAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGaa > 1:85824‑M1/2‑107 (MQ=255) AATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGc > 2:1169528‑M1/1‑149 (MQ=255) | CAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGC > NC_000913_3_pae_pgi/4218421‑4218716 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |