BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_pgi	3583428 =	NA (NA)	103 (1.230)	78/252	0.1	94.5%	intergenic (+10/‑55)	yrhA/insA	pseudogene, interrupted by IS1E/IS1 repressor TnpA
*	?	NC_000913_3_pae_pgi	= 3993097	6 (0.070)	103 (1.230)	78/252	0.1	94.5%	coding (1945/2547 nt)	cyaA	adenylate cyclase

Only 100 of 103 total aligned reads displayed.

AGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_pae_pgi/3583576‑3583428

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGCCGTTGAAGTGCAGCGTACGCACTTCGTTCCACGAGTTG  <  NC_000913_3_pae_pgi/3993097‑3992949

AGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA                                                                                                                                                      >  2:964751/1‑150

        CGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCGCCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCA                                                                                                                                              <  1:182163/150‑1

                TCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGG                                                                                                                                      <  3:215923/150‑1

                  CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGC                                                                                                                                               >  2:225541/1‑139

                  CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGC                                                                                                                                               <  1:225541/139‑1

                        TGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACA                                                                                                                              <  1:473235/150‑1

                           TTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAA                                                                                                                           <  3:569648/150‑1

                             TTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCGGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGA                                                                                                                         >  3:291075/1‑150

                               GCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACT                                                                                                                       >  1:1022934/1‑150

                                CCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTT                                                                                                                      <  1:887810/150‑1

                                  GTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCC                                                                                                                    >  2:348438/1‑150

                                  GTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCC                                                                                                                    <  3:579928/150‑1

                                     ACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACG                                                                                                                 <  1:964751/150‑1

                                       GCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCT                                                                                                               >  3:160847/1‑150

                                        CACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTA                                                                                                              >  1:258754/1‑150

                                         ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTAT                                                                                                             >  4:260118/1‑150

                                           CACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCA                                                                                                                   >  2:561267/1‑142

                                           CACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCA                                                                                                                   <  1:561267/142‑1

                                            ACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGC                                                                                                                >  2:155324/1‑144

                                            ACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGC                                                                                                                <  1:155324/144‑1

                                               CCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCG                                                                                                       <  4:160847/150‑1

                                                  TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTG                                                                                                    <  2:258754/150‑1

                                                   CAGTAGCGGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGGGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGC                                                                                                   <  1:142577/150‑1

                                                    AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCG                                                                                                  <  1:348438/150‑1

                                                         CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAG                                                                                                                             <  1:724610/118‑1

                                                         CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAG                                                                                                                             >  2:724610/1‑118

                                                         CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCA                                                                                                                                              <  2:509092/101‑1

                                                         CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCA                                                                                                                                              >  1:509092/1‑101

                                                          TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCT                                                                                                                                        <  2:898935/106‑1

                                                          TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCT                                                                                                                                        >  1:898935/1‑106

                                                           GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCT                                                                                           <  2:963445/150‑1

                                                             ACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGA                                                                                         >  1:997050/1‑150

                                                              CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGAT                                                                                        >  3:189187/1‑150

                                                                GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGC                                                                                      <  2:1022934/150‑1

                                                                 GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCA                                                                                     >  1:562481/1‑150

                                                                 GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCA                                                                                     >  4:495260/1‑150

                                                                  AGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCAT                                                                                    >  2:656255/1‑150

                                                                   GGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATT                                                                                   >  3:156112/1‑150

                                                                    GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTT                                                                                  >  3:224000/1‑150

                                                                          CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAA                                                                                                                                <  1:645481/98‑1

                                                                          CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAA                                                                                                                                >  2:645481/1‑98

                                                                                 AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGT                                                                     >  1:622940/1‑150

                                                                                  AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGA                                                                                                                         <  1:990609/97‑1

                                                                                  AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGA                                                                                                                         >  2:990609/1‑97

                                                                                      GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCA                                                                <  3:495260/150‑1

                                                                                        AGCCACTGGGGCACCTCAAAAACACCATCCTACACTAAAGCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGG                                                              <  4:156112/150‑1

                                                                                         GCCACTGGAGCACCTCAAAAACACCATCATACACTACATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGG                                                             >  2:146305/1‑150

                                                                                          CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGT                                                                                                     <  1:234297/109‑1

                                                                                          CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGT                                                                                                     >  2:234297/1‑109

                                                                                            ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTT                                                          >  4:52088/1‑150

                                                                                            ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTT                                                          <  1:865460/150‑1

                                                                                            ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACG                                                                                                                 >  2:812036/1‑95

                                                                                            ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACG                                                                                                                 <  1:812036/95‑1

                                                                                                GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGAGCGGCATCCTGATGCATTTTGCCGAGAATAGCTTTCAGGGCTTCGAT                                                      >  2:765665/1‑150

                                                                                                GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTAT                                                                                                             >  2:323829/1‑95

                                                                                                GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTAT                                                                                                             <  1:323829/95‑1

                                                                                                  GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGA                                                                            <  1:653120/126‑1

                                                                                                  GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGA                                                                            >  2:653120/1‑126

                                                                                                  GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGG                                                                                                         >  1:352137/1‑97

                                                                                                  GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGG                                                                                                         <  2:352137/97‑1

                                                                                                    ACCGCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATC                                                  <  1:146305/150‑1

                                                                                                      CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATATGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGA                                                >  1:741759/1‑150

                                                                                                       TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGAT                                               >  3:233411/1‑150

                                                                                                       TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGAT                                               >  3:558536/1‑150

                                                                                                       TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCC                                                                              <  2:605301/119‑1

                                                                                                       TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCC                                                                              >  1:605301/1‑119

                                                                                                              CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGC                                        <  4:189187/150‑1

                                                                                                                CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGCCG                                      <  2:997050/150‑1

                                                                                                                 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGCCGT                                     >  3:368490/1‑150

                                                                                                                   TCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTCCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGCCGTTG                                   >  4:476811/1‑150

                                                                                                                       ACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGCCGTTGAAGT                               >  2:335542/1‑150

                                                                                                                       ACACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGCCGTTGAAGT                               >  1:295255/1‑150

                                                                                                                         ACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTa                                                          >  2:649599/1‑120

                                                                                                                         ACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGC                                        <  2:323219/139‑1

                                                                                                                         ACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGC                                        >  1:323219/1‑139

                                                                                                                         ACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTT                                                          <  1:649599/121‑1

                                                                                                                         ACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACT                                                                                                                       <  2:572839/60‑1

                                                                                                                         ACTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACT                                                                                                                       >  1:572839/1‑60

                                                                                                                          CTAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGCCGTTGAAGTGCA                            >  1:192790/1‑150

                                                                                                                           TAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGCCGTTGAAGTGCAG                           >  1:1020158/1‑150

                                                                                                                           TAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGG                                                                                                         <  3:219359/72‑1

                                                                                                                           TAAATCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGG                                                                                                         >  4:219359/1‑72

                                                                                                                               gCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGCCGTTGAAGTGCAGCGTA                       <  2:243847/149‑1

                                                                                                                               TCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCT                                                                                           <  2:861975/82‑1

                                                                                                                               TCAGTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCT                                                                                           >  1:861975/1‑82

                                                                                                                                  GTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCAAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGC                                        >  3:226298/1‑130

                                                                                                                                  GTAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCAAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGC                                        <  4:226298/130‑1

                                                                                                                                   TAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAA                                                                         <  2:2002/96‑1

                                                                                                                                   TAAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAA                                                                         >  1:2002/1‑96

                                                                                                                                    AAGTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGCCGTTGAAGTGCAGCGTACGCAC                  >  1:294740/1‑150

                                                                                                                                      GTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATC                                                  <  1:461077/116‑1

                                                                                                                                      GTTGGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATC                                                  >  2:461077/1‑116

                                                                                                                                         GGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGCCGTTGAAGTGCAGCGTACGCACTTCGT             <  1:335542/150‑1

                                                                                                                                         GGCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGCCGTTGAAGTGCAGCGTACGCACTTCGT             <  1:656255/150‑1

                                                                                                                                          GCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGCCGTTGAAGTGCAGCGTACGCACTTCGTT            >  1:272285/1‑150

                                                                                                                                          GCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGCCGTTGAAGTGCAGCGTACG                     <  3:517085/141‑1

                                                                                                                                          GCAGCATCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGCCGTTGAAGTGCAGCGTACG                     >  4:517085/1‑141

                                                                                                                                                TCACCAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGCCGTTGAAGTGCAGCGTACGCACTTCGTTCCACGA      <  4:368490/150‑1

                                                                                                                                                    CAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGCCGTTGAAGTGCAGCGTACGCACTTCGTTCCACGAGTTG  >  3:582524/1‑150

                                                                                                                                                    CAGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGCCGTTGAAGTGCAGCGTACGCACTTCGTTCCACGAGTTG  >  2:266185/1‑150

AGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_pae_pgi/3583576‑3583428

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCCGCGCAGATGCTGGCTATAACAGAAGACTTCCACGCTATCTGGCGGTGCGGCGTCCTGATGCATTTTGCCGAGAATAGTTTTCAGGGCTTCGATCATCGATTGCTCGCCGTTGAAGTGCAGCGTACGCACTTCGTTCCACGAGTTG  <  NC_000913_3_pae_pgi/3993097‑3992949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.