| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_pgi | 3583428 = | NA (NA) | 103 (1.230) | 78/252 | 0.1 | 94.5% | intergenic (+10/‑55) | yrhA/insA | pseudogene, interrupted by IS1E/IS1 repressor TnpA |
| ? | NC_000913_3_pae_pgi | = 3993097 | 6 (0.070) | coding (1945/2547 nt) | cyaA | adenylate cyclase | |||||
Only 100 of 183 total aligned reads displayed.
CAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAG > NC_000913_3_pae_pgi/3992949‑3993246 | cAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTg > 3:582524‑M2/1‑149 (MQ=255) gcataacctgaatctgaggcagcacctggcacggctgggacggaagacgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTa > 1:664274‑M2/139‑150 (MQ=255) taacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAAtt > 3:185492‑M2/136‑150 (MQ=255) ctgaatctgaggcagcacgtggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgcacataaaacactatcaataagttggagtcattacTTGCGCGGCTTAATTCGTa > 2:637960‑M2/132‑150 (MQ=255) tgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGt > 4:480500‑M2/125‑150 (MQ=255) gTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaactt > 1:294740‑M2/1‑133 (MQ=255) aggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCACGGCTTAATTCGTACTCGCGTgc > 2:574956‑M2/123‑150 (MQ=255) gcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTgcag < 3:543564‑M2/30‑1 (MQ=255) cGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgc > 4:517085‑M2/1‑130 (MQ=255) cGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgc < 3:517085‑M2/141‑12 (MQ=255) cTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgattta > 1:1020158‑M2/1‑124 (MQ=255) gcacggctgggacggaagccgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGttt < 1:527215‑M2/40‑1 (MQ=255) aCTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgt > 2:335542‑M2/1‑120 (MQ=255) aCGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatg > 3:368490‑M2/1‑114 (MQ=255) cGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatgg < 2:997050‑M2/150‑38 (MQ=255) gCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTTGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttac > 3:226298‑M2/1‑111 (MQ=255) gCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagt > 1:323219‑M2/1‑111 (MQ=255) gCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagt < 2:323219‑M2/139‑29 (MQ=255) aTCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttga > 3:233411‑M2/1‑104 (MQ=255) aTCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttga > 3:558536‑M2/1‑104 (MQ=255) tCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCATATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag > 1:741759‑M2/1‑103 (MQ=255) gatgatCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatg < 1:812158‑M2/137‑37 (MQ=255) gatgatCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatg > 2:812158‑M2/1‑101 (MQ=255) gatgatCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaac < 1:461077‑M2/116‑16 (MQ=255) cgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCg < 2:353854‑M2/59‑1 (MQ=255) atCGAAGCCCTGAAAGCTATTCTCGGCAAAATGCATCAGGATGCCGCTCCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctc > 2:765665‑M2/1‑97 (MQ=255) tcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCttt < 1:551811‑M2/64‑1 (MQ=255) ttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCa < 4:316554‑M2/67‑1 (MQ=255) tagCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagt > 2:649599‑M2/2‑93 (MQ=255) aaGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt < 1:865460‑M2/150‑58 (MQ=255) cccTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatgtagtgtatgatggtgtttttgaggtgctccagtggc > 2:146305‑M2/1‑90 (MQ=255) ccTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgctttagtgtaggatggtgtttttgaggtgccccagtggct < 4:156112‑M2/150‑62 (MQ=255) tGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttc < 3:495260‑M2/150‑64 (MQ=255) aCTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttt > 1:622940‑M2/1‑82 (MQ=255) ttCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaactta < 2:2002‑M2/96‑19 (MQ=255) ttCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaactta > 1:2002‑M2/1‑78 (MQ=255) tcGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgc < 1:653120‑M2/126‑52 (MQ=255) gcatgacaaattcatcggtcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCtt < 4:119113‑M2/63‑1 (MQ=255) gcatgacaaattcatcggtcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCtt > 3:119113‑M2/64‑126 (MQ=255) catgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGc < 4:356731‑M2/58‑1 (MQ=255) catgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGc > 1:280102‑M2/63‑150 (MQ=255) acaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCg < 2:100292‑M2/74‑1 (MQ=255) acaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCg > 1:100292‑M2/59‑132 (MQ=255) acaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGttt > 4:290703‑M2/59‑150 (MQ=255) aaTGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccc > 3:156112‑M2/1‑68 (MQ=255) caaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGa < 1:716440‑M2/44‑1 (MQ=255) aTGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccct > 2:656255‑M2/1‑67 (MQ=255) tGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctc > 1:562481‑M2/1‑66 (MQ=255) aGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactga < 2:861975‑M2/82‑23 (MQ=255) gggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTgc < 3:290703‑M2/103‑1 (MQ=255) gcACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgccccagtggcttctgtttctatcagctgtccctcctgttccgctactg < 1:142577‑M2/150‑99 (MQ=255) tatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGttt < 4:185492‑M2/109‑1 (MQ=255) cACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactga < 2:258754‑M2/150‑100 (MQ=255) atctgaacataaaacactatcaataagttggagtcattacCTGCATGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTc < 1:574956‑M2/110‑1 (MQ=255) aCCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtgg > 2:234297‑M2/1‑50 (MQ=255) cGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacgg < 4:160847‑M2/150‑103 (MQ=255) tgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTc < 2:296729‑M2/61‑1 (MQ=255) gaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGt < 4:397078‑M2/114‑1 (MQ=255) ccAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgc > 1:352137‑M2/1‑46 (MQ=255) ccAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgattta > 4:219359‑M2/1‑46 (MQ=255) aTAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggt > 4:260118‑M2/1‑42 (MQ=255) aTAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctc < 1:323829‑M2/95‑54 (MQ=255) tAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtg > 1:258754‑M2/1‑41 (MQ=255) aaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAAcc > 2:295349‑M2/31‑150 (MQ=255) gCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggt < 1:155324‑M2/144‑106 (MQ=255) gCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggt > 2:155324‑M2/1‑39 (MQ=255) cGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt > 2:812036‑M2/1‑38 (MQ=255) cGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt < 1:812036‑M2/95‑58 (MQ=255) aacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCt < 3:304072‑M2/42‑1 (MQ=255) aacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTc < 1:336020‑M2/65‑1 (MQ=255) acactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTgg < 2:280102‑M2/123‑1 (MQ=255) tGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtg > 2:561267‑M2/1‑36 (MQ=255) ggAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaac > 2:348438‑M2/1‑35 (MQ=255) ggAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaac < 3:579928‑M2/150‑116 (MQ=255) tatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGgt > 1:507075‑M2/24‑150 (MQ=255) tatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGgt > 3:415263‑M2/24‑150 (MQ=255) atcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGGCTTTCCAGCACCCGCCATGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGgtt > 4:538345‑M2/23‑150 (MQ=255) aGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggc > 4:579928‑M2/1‑32 (MQ=255) tcttctGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt < 1:990609‑M2/97‑68 (MQ=255) aataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAgtgt > 3:223970‑M2/20‑67 (MQ=255) aataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAgtgt < 4:223970‑M2/48‑1 (MQ=255) ataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTgggg < 3:414489‑M2/125‑1 (MQ=255) ataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTgggg > 4:414489‑M2/19‑143 (MQ=255) ataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGttc < 3:335151‑M2/132‑1 (MQ=255) ctGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcag > 2:724610‑M2/1‑26 (MQ=255) tGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagca < 1:473235‑M2/150‑126 (MQ=255) agttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTgg < 2:461923‑M2/123‑1 (MQ=255) gttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCg < 1:295349‑M2/136‑1 (MQ=255) ttATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag > 2:645481‑M2/1‑23 (MQ=255) ttATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag < 1:645481‑M2/98‑76 (MQ=255) gtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTg > 2:70280‑M2/9‑120 (MQ=255) ccAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccgga < 3:215923‑M2/150‑134 (MQ=255) aGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttca < 2:898935‑M2/106‑92 (MQ=255) aGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttca > 1:898935‑M2/1‑15 (MQ=255) tGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggcggtgcgtaacggcaaaagcaccgccggacatcagcg < 1:182163‑M2/150‑142 (MQ=255) tGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcag < 2:509092‑M2/101‑93 (MQ=255) gcgcGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccg < 1:225541‑M2/139‑132 (MQ=255) cgcgGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCCGCCCCCGCCAGCAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCg < 1:359094/150‑1 (MQ=255) gCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTAc > 2:837625/1‑150 (MQ=255) tggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctct > 2:964751‑M2/1‑1 (MQ=255) | CAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAG > NC_000913_3_pae_pgi/3992949‑3993246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |