New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA 3783584 =49 (1.010)5 (0.110) 5/266 5.9 9.6% coding (78/1020 nt) gpsA glycerol‑3‑phosphate dehydrogenase (NAD+)
?NC_000913_3_hsa_tpiA 3783606 = 48 (1.050)coding (56/1020 nt) gpsA glycerol‑3‑phosphate dehydrogenase (NAD+)
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGGCTGCCAGCGCAGTGGCGAGATCGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAGCGCATCGAA  >  NC_000913_3_hsa_tpiA/3783436‑3783732
                                                                                                                                                    |                                                                                                                                                    
tggctgCCAGCGCAGTGGCGAGATCGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCAttt                                                                                                                                                      >  1:101209/1‑149 (MQ=255)
     gCCAGCGCAGTGGCGAGATCGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGc                                                                                                                                                 >  1:229118/1‑149 (MQ=255)
           gcAGTGGCGAGATCGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCACTTCTTGCCAGGGt                                                                                                                                           <  2:300572/149‑1 (MQ=255)
             aGTGGCGAGATCGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGGGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTGCTGGCCATTTCTTGCCAGGGTGa                                                                                                                                         >  2:92180/1‑149 (MQ=255)
               tGGCGAGTTCGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATTGGGGAGAAAGGCGGCGTTACGGTGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATg                                                                                                                                       <  2:168/149‑1 (MQ=255)
                    agaTCGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAag                                                                                                                                  <  1:59881/149‑1 (MQ=255)
                        cGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACGGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCg                                                                                                                              <  1:329803/149‑1 (MQ=255)
                           tttCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCGCGTGGCCATTTCTTGCCAGGGTGCGGGCCAGAGCGGTg                                                                                                                           >  2:276220/1‑149 (MQ=255)
                           tttCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGAGATGTTCAGGGTCATGGCACCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTg                                                                                                                           >  1:778375/1‑149 (MQ=255)
                           tttCAAGATGGACCGTATCGGGAGAATGCACATCGGGGAGAAACGCGGCGTTACAGCGGGCGCGTGCACGCGTTGCGCTATGTTCAGGGTCATAGCACCAGAGGACAACCCAGTGGCCATTTCTTGCCAGGGTGAAGGCCGGACCGGTg                                                                                                                           >  2:572425/1‑149 (MQ=255)
                              cAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGGCg                                                                                                                        >  1:272275/1‑149 (MQ=255)
                               aaGATGGAGCGTATCGGGAAAAGGCAAATAGTTCAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGt                                                                                                                       >  2:608607/1‑149 (MQ=255)
                                          tATCGGGAAAGGCACATCGGGGAGAACCGCGTCGTTACAGCGGGCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCAc                                                                                                           <  1:22335/149‑1 (MQ=255)
                                            tCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCAcc                                                                                                          >  1:730356/1‑149 (MQ=255)
                                               ggAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGAt                                                                                                       >  1:521573/1‑149 (MQ=255)
                                               ggAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGAt                                                                                                       >  1:435227/1‑149 (MQ=255)
                                                   aaGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTGCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATcaca                                                                                                   <  1:51036/149‑1 (MQ=255)
                                                           tCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGATGATGGCAAGAGCGGTGCCGTATGAGCCGGCACCGATCACAGTCAGTGa                                                                                           >  1:477307/1‑149 (MQ=255)
                                                             ggggAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAg                                                                                         <  2:557883/149‑1 (MQ=255)
                                                               ggAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCa                                                                                       >  2:559103/1‑149 (MQ=255)
                                                                gagaAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGAGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGACGGCACCGATCACAGTCATTGAAGCAt                                                                                      >  2:176796/1‑149 (MQ=255)
                                                                   aaaCGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTAc                                                                                   <  1:559103/149‑1 (MQ=255)
                                                                     aCGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCAtt                                                                                     >  1:681650/1‑145 (MQ=255)
                                                                     aCGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCAtt                                                                                     <  2:681650/145‑1 (MQ=255)
                                                                     aCGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGt                                                                                 <  2:435227/149‑1 (MQ=255)
                                                                       gcggcgTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTg                                                                               >  1:22212/1‑149 (MQ=255)
                                                                         ggcgTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGa                                                                                                        >  2:417020/1‑122 (MQ=255)
                                                                         ggcgTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGa                                                                                                        <  1:417020/122‑1 (MQ=255)
                                                                               aCAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTtcatca                                                                       <  1:473038/149‑1 (MQ=255)
                                                                               aCAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTtcatca                                                                       <  1:472471/149‑1 (MQ=255)
                                                                                     gTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATc                                                                 <  2:521573/149‑1 (MQ=255)
                                                                                                     gagATATGTTCAGGGTCATGGCCCCAGGGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTa                                                 <  2:136463/147‑1 (MQ=255)
                                                                                                          atGTTCAGGGTCATGGCCCCAGATGACAACCTCGTGGCCAGTTCTACCCAGGGTGATGGCAAGCGCGGTGCCGTACGAGCCGGCACCGTTCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTc                                            <  1:247457/149‑1 (MQ=255)
                                                                                                             ttCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGcc                                         >  1:146228/1‑149 (MQ=255)
                                                                                                             ttCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGcc                                         >  2:541722/1‑149 (MQ=255)
                                                                                                              tgggggTCATCGCCCGCGAGGCCAACGTCGTCGGCTTGTCTTGCCAGGGTAATGGCAAGAGCGGGGCCGTACGAGCCGTCACCGAGCACAGTCATTGAAGCAGTACGTTGGTTCAGCAGGCATCCTGATGTTCTTCAGTACCGTGGCCa                                        <  2:154268/146‑1 (MQ=255)
                                                                                                                  ggTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCct                                    >  2:580633/1‑149 (MQ=255)
                                                                                                                       tGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGTGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGACATCCTGATGTTCTTCAGTACCTTCGCCAGCctgctgc                               >  1:626912/1‑149 (MQ=255)
                                                                                                                       tGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCctgctgc                               >  1:610032/1‑149 (MQ=255)
                                                                                                                         gCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATAAGGCATCCTGATATTCTTCAGTACCTTCGCCAGCctgctgctg                             >  2:267928/1‑149 (MQ=255)
                                                                                                                             cAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTGGCCAGCCTGCTGCTGCaaa                         <  2:713552/149‑1 (MQ=255)
                                                                                                                             cAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTAGCCAGCCTGCTGCTGCaaa                         >  2:221102/1‑149 (MQ=255)
                                                                                                                                   aCAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGt                                                                             >  1:805734/1‑91 (MQ=255)
                                                                                                                                   aCAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGt                                                                             <  2:805734/91‑1 (MQ=255)
                                                                                                                                     atcccggTGGGCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCGGTACCGTCCGGCACCGATCACAGTCATTGAAGCACGACGTTGGTTCATCAGGCATCCTGATGTTCTGTAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCAt                 <  2:429220/143‑1 (MQ=255)
                                                                                                                                     aaCCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAAttgggcat                 <  2:778375/149‑8 (MQ=255)
                                                                                                                                       ccTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAACTAGTTCATGa               >  2:675759/1‑149 (MQ=255)
                                                                                                                                            tGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAgc          <  2:101209/149‑1 (MQ=255)
                                                                                                                                                 aTTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAGCGCATc     >  1:378288/1‑149 (MQ=255)
                                                                                                                                                    tCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAGCGCATCGaa  <  2:22212/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TGGCTGCCAGCGCAGTGGCGAGATCGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAGCGCATCGAA  >  NC_000913_3_hsa_tpiA/3783436‑3783732

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.