New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	3783584 =	49 (1.010)	5 (0.110)	5/266	5.9	9.6%	coding (78/1020 nt)	gpsA	glycerol‑3‑phosphate dehydrogenase (NAD+)
	?	NC_000913_3_hsa_tpiA	3783606 =	48 (1.050)					coding (56/1020 nt)	gpsA	glycerol‑3‑phosphate dehydrogenase (NAD+)
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAGCGCATCGAAGTTAACCGGCGCAAGGTT  >  NC_000913_3_hsa_tpiA/3783460‑3783750                                                                                                                                                   |                                                                                                                                                 cGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACGGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCg                                                                                                                                                <  1:329803/149‑1 (MQ=255)    tttCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCGCGTGGCCATTTCTTGCCAGGGTGCGGGCCAGAGCGGTg                                                                                                                                             >  2:276220/1‑149 (MQ=255)    tttCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGAGATGTTCAGGGTCATGGCACCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTg                                                                                                                                             >  1:778375/1‑149 (MQ=255)    tttCAAGATGGACCGTATCGGGAGAATGCACATCGGGGAGAAACGCGGCGTTACAGCGGGCGCGTGCACGCGTTGCGCTATGTTCAGGGTCATAGCACCAGAGGACAACCCAGTGGCCATTTCTTGCCAGGGTGAAGGCCGGACCGGTg                                                                                                                                             >  2:572425/1‑149 (MQ=255)       cAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGGCg                                                                                                                                          >  1:272275/1‑149 (MQ=255)        aaGATGGAGCGTATCGGGAAAAGGCAAATAGTTCAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGt                                                                                                                                         >  2:608607/1‑149 (MQ=255)                   tATCGGG‑AAAGGCACATCGGGGAGAACCGCGTCGTTACAGCGGGCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCAc                                                                                                                             <  1:22335/149‑1 (MQ=255)                     tCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCAcc                                                                                                                            >  1:730356/1‑149 (MQ=255)                        ggAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGAt                                                                                                                         >  1:435227/1‑149 (MQ=255)                        ggAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGAt                                                                                                                         >  1:521573/1‑149 (MQ=255)                            aaGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTGCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATcaca                                                                                                                     <  1:51036/149‑1 (MQ=255)                                    tCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGATGATGGCAAGAGCGGTGCCGTATGAGCCGGCACCGATCACAGTCAGTGa                                                                                                             >  1:477307/1‑149 (MQ=255)                                      ggggAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAg                                                                                                           <  2:557883/149‑1 (MQ=255)                                        ggAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCa                                                                                                         >  2:559103/1‑149 (MQ=255)                                         gagaAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGAGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGACGGCACCGATCACAGTCATTGAAGCAt                                                                                                        >  2:176796/1‑149 (MQ=255)                                            aaaCGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTAc                                                                                                     <  1:559103/149‑1 (MQ=255)                                              aCGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCAtt                                                                                                       <  2:681650/145‑1 (MQ=255)                                              aCGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCAtt                                                                                                       >  1:681650/1‑145 (MQ=255)                                              aCGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGt                                                                                                   <  2:435227/149‑1 (MQ=255)                                                gcggcgTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTg                                                                                                 >  1:22212/1‑149 (MQ=255)                                                  ggcgTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGa                                                                                                                          <  1:417020/122‑1 (MQ=255)                                                  ggcgTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGa                                                                                                                          >  2:417020/1‑122 (MQ=255)                                                        aCAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTtcatca                                                                                         <  1:473038/149‑1 (MQ=255)                                                        aCAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTtcatca                                                                                         <  1:472471/149‑1 (MQ=255)                                                              gTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATc                                                                                   <  2:521573/149‑1 (MQ=255)                                                                              gagATATGTTCAGGGTCATGGCCCCAGGGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTa                                                                   <  2:136463/147‑1 (MQ=255)                                                                                   atGTTCAGGGTCATGGCCCCAGATGACAACCTCGTGGCCAGTTCTACCCAGGGTGATGGCAAGCGCGGTGCCGTACGAGCCGGCACCGTTCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTc                                                              <  1:247457/149‑1 (MQ=255)                                                                                      ttCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGcc                                                           >  2:541722/1‑149 (MQ=255)                                                                                      ttCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGcc                                                           >  1:146228/1‑149 (MQ=255)                                                                                       tgggggTCATCGCCCGCGAGGCCAACGTCGTCGGCTTGTCTTGCCAGGGTAATGGCAAGAGCGGGGCCGTACGAGCCGTCACCGAGCACAGTCATTGAAGCAGTACGTTGGTTCAGCAGGCATCCTGATGTTCTTCAGTACCGTGGCCa                                                          <  2:154268/146‑1 (MQ=255)                                                                                           ggTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCct                                                      >  2:580633/1‑149 (MQ=255)                                                                                                tGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGTGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGACATCCTGATGTTCTTCAGTACCTTCGCCAGCctgctgc                                                 >  1:626912/1‑149 (MQ=255)                                                                                                tGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCctgctgc                                                 >  1:610032/1‑149 (MQ=255)                                                                                                  gCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATAAGGCATCCTGATATTCTTCAGTACCTTCGCCAGCctgctgctg                                               >  2:267928/1‑149 (MQ=255)                                                                                                      cAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTGGCCAGCCTGCTGCTGCaaa                                           <  2:713552/149‑1 (MQ=255)                                                                                                      cAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTAGCCAGCCTGCTGCTGCaaa                                           >  2:221102/1‑149 (MQ=255)                                                                                                            aCAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGt                                                                                               <  2:805734/91‑1 (MQ=255)                                                                                                            aCAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGt                                                                                               >  1:805734/1‑91 (MQ=255)                                                                                                              atcccggTGGGCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCGGTACCGTCCGGCACCGATCACAGTCATTGAAGCACGACGTTGGTTCATCAGGCATCCTGATGTTCTGTAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCAt                                   <  2:429220/143‑1 (MQ=255)                                                                                                              aaCCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAAttgggcat                                   <  2:778375/149‑8 (MQ=255)                                                                                                                ccTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAACTAGTTCATGa                                 >  2:675759/1‑149 (MQ=255)                                                                                                                     tGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAgc                            <  2:101209/149‑1 (MQ=255)                                                                                                                          aTTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAGCGCATc                       >  1:378288/1‑149 (MQ=255)                                                                                                                             tCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAGCGCATCGaa                    <  2:22212/149‑1 (MQ=255)                                                                                                                              cTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAGCGCATCGAAg                   <  2:378288/149‑1 (MQ=255)                                                                                                                               ttGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTAATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAGCGCATCGAAGt                  >  2:610144/1‑149 (MQ=255)                                                                                                                                   cAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAGCGCATCGAAGTTAAc              >  1:787866/1‑149 (MQ=255)                                                                                                                                         gATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAGCGCATCGAAGTTAACCGgcgc        >  2:840322/1‑149 (MQ=255)                                                                                                                                           tGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAGCGCATCGAAGTTAACCGGCGCaa      >  1:319613/1‑149 (MQ=255)                                                                                                                                               aaGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATGAGGCATCCTGATATTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAGCGCATCCGACTTGACCAGCGCAAGGtt  >  1:326995/1‑149 (MQ=255)                                                                                                                                               aaGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAGCGCATCGAAGTTAACCGGCGCAAGGtt  <  1:840322/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                 CGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAGCGCATCGAAGTTAACCGGCGCAAGGTT  >  NC_000913_3_hsa_tpiA/3783460‑3783750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.