| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_tpiA | = 1226143 | 19 (0.770) | 4 (0.170) | 4/266 | 2.8 | 17.5% | intergenic (‑63/‑457) | minC/ycgJ | inhibitor of FtsZ ring polymerization/uncharacterized protein |
| ? | NC_000913_3_hsa_tpiA | = 1226149 | 20 (0.870) | intergenic (‑69/‑451) | minC/ycgJ | inhibitor of FtsZ ring polymerization/uncharacterized protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGGATAACCTTAGGTTCTGCCTCATGCAGATGAACCACAGATAAAGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATGGCGCTGATTCATAGCTTAAAAAATACCCTTGTCAATCAAC > NC_000913_3_hsa_tpiA/1225995‑1226262 | tGGATAACCTTAGGTTCTGCCTCATGCAGATGAACCACAGATAAAGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTGAATGAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAA > 1:335951‑M1/1‑149 (MQ=255) tCATGCAGATGAACCACAGATAAAGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCAGCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATta > 2:324449/1‑149 (MQ=255) aGATGAACCACAGATAAAGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGa > 2:193086/1‑149 (MQ=255) gATGAACCACAGATAAAGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAg < 1:10039/149‑1 (MQ=255) gATGAACCACAGATAAAGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAg < 1:193086/149‑1 (MQ=255) aTGAACCACAGATAAAGTGAAGCTACTGCCTTTAAGCCCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAgg < 1:150374/149‑1 (MQ=255) cacaGATAAAGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTTGCCTTACTCAATTAGCTATTAATCATCGCCAGCTCGCGATGATTTTCCGAAGACTATAAGGCACGTTATAGTCTGGATTATATTGAGGctaatc > 2:288222/1‑144 (MQ=255) aGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCa > 1:271186/1‑149 (MQ=255) aCTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCAt > 2:184154/1‑101 (MQ=255) aCTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCAt < 1:184154/101‑1 (MQ=255) cTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCaga > 1:34090/1‑149 (MQ=255) tttAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGATATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTaaa < 2:404217/149‑1 (MQ=255) tCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTAt > 1:102727/1‑149 (MQ=255) gCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAcatgccttatagtcttcggaacatcatcgcgcgctggcga < 2:159331‑M1/116‑41 (MQ=255) gCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAcatgccttatagtcttcggaacatcatcgcgcgctggcga > 1:159331‑M1/1‑76 (MQ=255) gCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGa < 2:102727/149‑1 (MQ=255) aaTTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAcatgccttatagtc > 2:173873‑M1/1‑50 (MQ=255) aaTTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAcatgccttatagtc < 1:173873‑M1/64‑15 (MQ=255) aTTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATGGCGCTGATTCATAGCTTaaaa > 1:390124/1‑149 (MQ=255) tATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATGGCGCTGATTCATAGCTTAAAAAATAcc > 1:128324/1‑149 (MQ=255) aaTCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATGGCGCTGATTCATAGCTTAAAAGATACCCTTg > 1:347724/1‑149 (MQ=255) aaTCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTAAGAGTGAAAGTCCATTCTGTGATAAATGGCGCTGATTCATAGCTTAAAAAATACCCTTg > 1:297448/1‑149 (MQ=255) tcatcGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATGGCGCTGATTCATAGCTTAAAAAATACCCTTGtc > 1:309247/1‑149 (MQ=255) tcGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGttatagtcttcggaacatcatcgcgcgctggcgatgattaatagctaattgagtaaggccaggatgtcaaacacgc < 2:159331‑M2/116‑77 (MQ=255) tcGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGttatagtcttcggaacatcatcgcgcgctggcgatgattaatagctaattgagtaaggccaggatgtcaaacacgc > 1:159331‑M2/1‑40 (MQ=255) cAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATGGCGCTGATTCATAGCTTAAAAAATACCCTTGTCAATCAAc < 1:324449/149‑1 (MQ=255) gACTATAAGGCATGttatagtcttcggaacatcatcgcgcgctggcgatgattaatagctaatt < 1:173873‑M2/64‑51 (MQ=255) gACTATAAGGCATGttatagtcttcggaacatcatcgcgcgctggcgatgattaatagctaatt > 2:173873‑M2/1‑14 (MQ=255) | TGGATAACCTTAGGTTCTGCCTCATGCAGATGAACCACAGATAAAGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATGGCGCTGATTCATAGCTTAAAAAATACCCTTGTCAATCAAC > NC_000913_3_hsa_tpiA/1225995‑1226262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |