New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 339904	55 (1.100)	6 (0.120)	6/270	6.1	9.8%	noncoding (148/358 nt)	REP23 (repetitive extragenic palindromic) element; contains 8 REP sequences	REP23 (repetitive extragenic palindromic) element; contains 8 REP sequences
	?	NC_000913_3_hsa_tpiA	= 2538632	NA (NA)					noncoding (98/98 nt)	RIP174 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP174 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCACGATCGCAGATGATCGCCACCACCACCGCGTCAGGGTTAG  >  NC_000913_3_hsa_tpiA/2538486‑2538778                                                                                                                                                   |                                                                                                                                                   aCTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGACAAGCGTAGCGCATCAGGccg                                                                                                                                                  >  2:37558/1‑147 (MQ=255)     cATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGtttt                                                                                                                                              >  1:552905/1‑149 (MQ=255)         tGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGt                                                                                                                                          <  1:233245/149‑1 (MQ=255)                agcaACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGtcat                                                                                                                                   >  1:40353/1‑149 (MQ=255)                agcaACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTCTGCGTTTGtcat                                                                                                                                   >  2:521346/1‑149 (MQ=255)                  caaaaaCTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGtcatca                                                                                                                                 <  1:16153/149‑1 (MQ=255)                           ttAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGAt                                                                                                                        <  2:547153/149‑1 (MQ=255)                            tAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATg                                                                                                                       <  1:132447/149‑1 (MQ=255)                              aaaaaGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCt                                                                                                                     >  2:667112/1‑149 (MQ=255)                                aaaGTGCGCTTTGTTTATGACGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTAt                                                                                                                   <  2:128459/149‑1 (MQ=255)                                     gcgcTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCCTCAGGAAGTTTTGCGGTTGTCATCAGTCTCCGATGCTATTAATc                                                                                                              >  1:394871/1‑149 (MQ=255)                                      cgcTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATcc                                                                                                             <  1:724390/149‑1 (MQ=255)                                      cgcCTTGTTTATGCCGGAGGAGGCGTCAACGCATTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATcc                                                                                                             <  1:869068/149‑1 (MQ=18)                                       gcTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCt                                                                                                            <  2:715047/149‑1 (MQ=255)                                       gcTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCt                                                                                                            >  2:479182/1‑149 (MQ=255)                                        cTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCtt                                                                                                           >  1:819481/1‑149 (MQ=255)                                        cTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCtt                                                                                                           >  2:276677/1‑149 (MQ=255)                                         tttGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTa                                                                                                          >  1:215399/1‑149 (MQ=255)                                         tttGTGTAGGCCGGATGCGGCGTAAACGCCTTAACCGGCGTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTa                                                                                                          <  2:512318/149‑1 (MQ=255)                                            gTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCCGTCTCCGAAGCTATTTATCCTTAAAt                                                                                                       >  2:689636/1‑149 (MQ=255)                                               tATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATccc                                                                                                    <  1:260108/149‑1 (MQ=255)                                               gaTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATccc                                                                                                    <  1:815072/148‑1 (MQ=255)                                                 tGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGCCTCCGATGCTATTAATCCTTAAATCCCCg                                                                                                  >  2:60509/1‑149 (MQ=255)                                                  gCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGc                                                                                                 >  2:820255/1‑149 (MQ=255)                                                   ccGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGcc                                                                                                >  1:49307/1‑149 (MQ=255)                                                    cGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGttt                                                                                                                                        >  2:881664/1‑108 (MQ=255)                                                    cGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGttt                                                                                                                                        <  1:881664/108‑1 (MQ=255)                                                        tGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTg                                                                                           <  2:215399/149‑1 (MQ=255)                                                             cgTAAACGCCTTATCCGGCCTACACAATCGTGCTACTTCAATATATTGCATAAAACTTGTCGGCATGATAAGCCTAGCGCATCAGGCAGTTTTACGTTTGTCATCAGTCTCCGATGCTATTAATACTTACATCACCGCCACCTgggcaa                                                                                      >  2:441820/1‑145 (MQ=18)                                                               tAAACGCCTTAACCGGCCTAAAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTaaaa                                                                                    <  2:202051/149‑1 (MQ=255)                                                                    gCCTTATCCGGCCTACAAAATCGGGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCATTAAATTTCCGCGCCCTGGGTGAAATGgtc                                                                               >  1:360223/1‑149 (MQ=21)                                                                      cTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCATAGCGCATCAGGCAGTCGTGCGTTTGTCATCAGTCTCTGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCtt                                                                             <  1:819487/149‑1 (MQ=255)                                                                         aTCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTccc                                                                          <  2:552905/149‑1 (MQ=255)                                                                            cGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTAGTAGGCATGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCTCCCCCTGGATAAAATGCTCTTCCCCaa                                                                       >  2:88688/1‑149 (MQ=255)                                                                             ggCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCaaa                                                                      <  2:837060/149‑1 (MQ=255)                                                                               ccTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATACGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAaca                                                                    <  1:835370/149‑1 (MQ=255)                                                                               ccTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAaca                                                                    <  1:705897/149‑1 (MQ=255)                                                                                  aCAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACAccc                                                                 <  2:40353/149‑1 (MQ=255)                                                                                     aaaTCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAACGCATCAGGAAAAAACTTAATTGTCAATATTGTCGGATGCTATTAATCCTTAAGTCCCCGCCCACTGGCTCAAATGCTCTTCCCCAAACACCCCgg                                                              >  2:683499/1‑149 (MQ=21)                                                                                      aaTCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACAccc                                                                 >  1:282824/1‑145 (MQ=255)                                                                                      aaTCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACAccc                                                                 <  2:282824/145‑1 (MQ=255)                                                                                      aaTCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATGAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGt                                                             <  1:597857/149‑1 (MQ=255)                                                                                       ctCGGGCTAATGCAAGATATTGCAGAAACCTTGTAGGCCTGATAATCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCGTCCGGGCTAAGATGCTCTTCCCCAAACACCCCGGTa                                                            <  2:422934/148‑1 (MQ=25)                                                                                        tCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTGAAATGCTCTTCCCCAAACACCCCGGCAg                                                           >  1:865586/1‑149 (MQ=255)                                                                                        tCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAg                                                           <  2:166102/149‑1 (MQ=255)                                                                                           tGCTAATTCAATATAAAGCAGAACACATGTCGGGCTGAAAAGCGATGCGCATCAGGCAGTCACGCGCGGGTCAGGAGTGTCGGATGCTATTAATCCTTAAATGCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGaaa                                                        <  2:306184/149‑1 (MQ=255)                                                                                            gCTAATTCAATATATTGCAGAAACCTTGGAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCCATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAg                                                       <  1:170616/149‑1 (MQ=255)                                                                                               aaTTCAATATATTGCAGAAAGCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAggga                                                    >  1:353510/1‑147 (MQ=255)                                                                                                 ttCAATATATTGCAGAAAGCTTGTAGGGCTGATAGGCGTAGCACATCAGGCAGATTTGCGTTGGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAAGGCTCTTCCCGCAACAACACGGAAGAAGGGTCGc                                                  >  2:212181/1‑149 (MQ=255)                                                                                                 ttCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACACCGGTAGAAAGGTAGc                                                  >  1:407062/1‑149 (MQ=255)                                                                                                      tatatTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCg                                             >  1:769937/1‑149 (MQ=255)                                                                                                        tatTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTTAAAAGGTAGCGATCGcc                                           >  1:145375/1‑149 (MQ=255)                                                                                                        tatTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGcc                                           <  2:806228/149‑1 (MQ=255)                                                                                                             cAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCACGAt                                      <  1:479182/149‑1 (MQ=255)                                                                                                                aaaCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGGTTTGCGTTTGTCATCAGTCTCCAATGCTATTAATCCTTAAATCCCCGCCCCCTGGCGAAAATGCTCTTCCCCAAACACCCCGGTAGACAGGTAGCGATCGCCACGATCGc                                   >  2:966/1‑149 (MQ=255)                                                                                                                 acccTGGTAGGCCTGATAAGCGTAGCGTATCTGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGTCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCACGATCGCa                                  <  1:825419/147‑1 (MQ=255)                                                                                                                 aaCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCACGATCGCa                                  <  1:820255/149‑1 (MQ=255)                                                                                                                           gCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGc                                                                                 <  2:305730/92‑1 (MQ=255)                                                                                                                           gCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGc                                                                                 >  1:305730/1‑92 (MQ=255)                                                                                                                           gCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGGAGAAAGGTAGGGGTCGCCACGACCGCACATGATCGcc                        >  2:320679/1‑149 (MQ=38)                                                                                                                             cTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCACGATCGCAGATGATCGccac                      >  1:562270/1‑149 (MQ=255)                                                                                                                              tGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCACGGAAGAAAGGTACCGATCCACAAGATGCGAGGTGATCGccccc                     >  2:245674/1‑149 (MQ=37)                                                                                                                                          cgcATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCACGATCGCAGATGATCGCCACCACCACCGCGTCa         <  2:353510/149‑1 (MQ=255)                                                                                                                                                aGGCAGTTTTGCGTTTGTCAGCAGTCTCCGATAACATTAATCCTTAAATCCCCGCCCCCTGGCTCAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCACGATCGCAGATGATCGCCACCACCACCGCGTCAGGGTTa   <  2:729362/149‑1 (MQ=255)                                                                                                                                                 ggCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCACGATCGCAGATGATCGCCACCACCACCGCGTCAGGGTTAg  >  2:71052/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                   ACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCACGATCGCAGATGATCGCCACCACCACCGCGTCAGGGTTAG  >  NC_000913_3_hsa_tpiA/2538486‑2538778

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.