New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	3856874 =	43 (1.020)	5 (0.130)	5/260	4.9	11.4%	intergenic (+10/+37)	yidI/yidJ	inner membrane protein/sulfatase/phosphatase superfamily protein
	?	NC_000913_3_hsa_tpiA	3856909 =	38 (0.980)					intergenic (+45/+2)	yidI/yidJ	inner membrane protein/sulfatase/phosphatase superfamily protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCGCTGGATGGGGGCGTTTCGTCCACGTCCACAAGATGGCTATTCGCCAGTTGTACGCGACTATGACACCGGCCTACCGACACAAGGGGTGAAGGTGGAGGAGAAAAAACAGAAGTTCTGACGATAATGCCCGCTGATGATCACCCGGCGGGCATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_hsa_tpiA/3857031‑3856874 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcattatCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCTTGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCC  >  NC_000913_3_hsa_tpiA/3856909‑3857050                                                                                                                                                                                                                                                                                                              GCGCTGGATGGGGGCGTTTCGTCCACGTCCACAAAATGGCTATTCGCCAGTTGTACGCGACTATGACACCGGCCTACCGACACAAGGGGTGAAGGTGGAGGAGAAAAAACAGAAGTTCTGACGATAATGCCCGCTGATGATCACCCGGC                                                                                                                                                         >  1:254802/1‑149     TGGATGGGGGCGTTTCGTCCACGTCCACAAGATGGCTATTCGCCAGTTGTACGCGACTATGACACCGGCCTACCGACACAAGGGGTGAAGGTGGAGGAGAAAAAACAGAAGTTCTGACGATAATGCCCGCTGATGATCACCCGGCGGGC                                                                                                                                                     >  2:207321/1‑149      GGATGGGGGCGTTTCGTCCACGTCCACAAGATGGCTATTCGCCAGTTGTACGCGACTATGACACCGGCCTACCGACACAAGGGGTGAAGGTGGAGGAGAAAAAACAGAAGTTCTGACGATAATGCCCGCTGATGATCACCCGGCGGGCA                                                                                                                                                    <  2:530905/149‑1                                                                                    AAGGGGTGAAGGTGGAGGAGAAAAAACAGAAGTTCTGACGATAATGCCCGCTGATGATCACCCGGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCTTGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAAC                                                                      >  2:450469/1‑149                                                                                                  GAGGAGAAAAAACAGAAGTTCTGACGATAATGCCCGCTGATGATCACCCGGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCTTGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCAT                                                        <  1:450469/149‑1                                                                                                                 AAGTTCTGACGATAATGCCCGCTGATGATCACCCGGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCTTGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCATGTTGGGGCCGTAGAa                                         >  1:444162/1‑148                                                                                                                               ATGCCCGCTGATGATCACCCGGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCTTGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCATCTTGT                                                   <  1:388173/125‑1                                                                                                                               ATGCCCGCTGATGATCACCCGGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCTTGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCATCTTGT                                                   >  2:388173/1‑125                                                                                                                                                    GCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCTTGTGTCGGTAGGCCGGTGTCATAGT                                                                                >  1:416520/1‑75                                                                                                                                                    GCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCTTGTGTCGGTAGGCCGGTGTCATAGT                                                                                <  2:416520/75‑1                                                                                                                                                        GCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCTTGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCC  >  2:17883/1‑149                                                                                                                                                                                                                                                                                                              GCGCTGGATGGGGGCGTTTCGTCCACGTCCACAAGATGGCTATTCGCCAGTTGTACGCGACTATGACACCGGCCTACCGACACAAGGGGTGAAGGTGGAGGAGAAAAAACAGAAGTTCTGACGATAATGCCCGCTGATGATCACCCGGCGGGCATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_hsa_tpiA/3857031‑3856874 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcattatCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCTTGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCC  >  NC_000913_3_hsa_tpiA/3856909‑3857050

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.