New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	3856874 =	43 (1.020)	5 (0.130)	5/260	4.9	11.4%	intergenic (+10/+37)	yidI/yidJ	inner membrane protein/sulfatase/phosphatase superfamily protein
	?	NC_000913_3_hsa_tpiA	3856909 =	38 (0.980)					intergenic (+45/+2)	yidI/yidJ	inner membrane protein/sulfatase/phosphatase superfamily protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCC  >  NC_000913_3_hsa_tpiA/3856763‑3857050                                                                                                                                                   |                                                                                                                                               aCGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGt                                                                                                                                              >  1:259434/1‑149 (MQ=255)   gCTGGCTTTCCATACCTTGCTTTTTGTTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCa                                                                                                                                            >  2:47513/1‑149 (MQ=255)   gCTGGCTTTCCATACATTGCTTTTTGGTCTCGGGAAGGTGTGCAGCATTTTGCTGATGTTCCTTATCTTTTCCTTCTTGACCGGCGGTTCACGGGTTTAAGCAGCCTGAATAATGCCCGCCGTGTGATACTCAGCGGGCATTATCGTCa                                                                                                                                            >  2:440674/1‑149 (MQ=255)     tGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGa                                                                                                                                          >  2:434529/1‑149 (MQ=255)         gttCCATACCTTGCTTGGTGGTGGCGGCGTCGTGTGCAGCATTGTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCGTCAGCGGGCATTATCGTCAGAACtt                                                                                                                                      <  2:408912/148‑1 (MQ=255)            ccATACCTTGCTTTTTGGTATCGGGAGTGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTg                                                                                                                                   <  2:279598/149‑1 (MQ=255)                  cTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGtttttt                                                                                                                             >  1:87686/1‑149 (MQ=255)                   ttGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTtc                                                                                                                            >  2:186733/1‑149 (MQ=255)                       tttttGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTctcct                                                                                                                        <  1:384935/149‑1 (MQ=255)                           tGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCAc                                                                                                                    <  1:270953/149‑1 (MQ=255)                                 cGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCAc                                                                                                              <  2:500751/149‑1 (MQ=255)                                 cGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCAc                                                                                                              <  1:47513/149‑1 (MQ=255)                                      tCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCt‑t                                                                                                        <  1:328427/149‑1 (MQ=255)                                      cgatctgCAGCATTTTGCTGATATTCCTTAGCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGTCGGGTGATCTCCAACGGGCATTAGCGTCAGAACGTCTGTTTTTTCTCCTCCACCTTCACCCCt‑t                                                                                                        <  1:145226/144‑1 (MQ=255)                                             cagcaTTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTCTCGTCCGCACTTCTGTTTTTTCTCCTCCACCTTCCCCCCT‑tgagctcg                                                                                                 >  2:145226/1‑143 (MQ=255)                                             cagcaTTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCgg                                                                                                 <  2:481098/149‑1 (MQ=255)                                             cagcaTTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCgg                                                                                                 >  1:207321/1‑149 (MQ=255)                                             cagcaTTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCgg                                                                                                 >  2:118196/1‑149 (MQ=255)                                              agcaTTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTCTCGGt                                                                                                >  1:523642/1‑149 (MQ=255)                                                  ttttGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGc                                                                                            <  1:434047/149‑1 (MQ=255)                                                      gCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGgt                                                                                        <  2:87686/149‑1 (MQ=255)                                                        tGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGgtgt                                                                                      >  2:36898/1‑149 (MQ=255)                                                         gATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTTCACCTTCACCCCT‑TGTGTCGCTCGGCCGGTGTc                                                                                     >  2:724664/1‑149 (MQ=255)                                                                 ttATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTcgc                                                                             <  2:259434/149‑1 (MQ=255)                                                                      ttttCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACa                                                                        >  2:701139/1‑149 (MQ=255)                                                                           cttccgGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTGTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTgg                                                                   <  2:239118/149‑1 (MQ=255)                                                                            ttcctGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGc                                                                  <  1:677505/149‑1 (MQ=255)                                                                            ttcctGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGc                                                                  <  1:434529/149‑1 (MQ=255)                                                                                 gACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATa                                                             <  1:678130/149‑1 (MQ=255)                                                                                    cggcggTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGcc                                                          <  1:36898/149‑1 (MQ=255)                                                                                        ggTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACTTCTGCATGATGCT‑TGCCGGTATCATCCTCTCATACAACTGGCGAATAGCCATCt                                                      >  1:541199/1‑149 (MQ=255)                                                                                                    tAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCATCTTgtggacgtgga                                          <  1:118196/149‑1 (MQ=255)                                                                                                     aaGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCATCTTgtggacgtggac                                         <  2:198939/149‑1 (MQ=255)                                                                                                                    tGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATcc                          >  2:530905/1‑149 (MQ=255)                                                                                                                     gCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCa                         <  2:207321/149‑1 (MQ=255)                                                                                                                         gccgGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCATTTTGTGGACGTGGACGAAACGCCCCCATCCAgcgc                     <  1:254802/149‑1 (MQ=255)                                                                                                                              gTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCg                >  2:498220/1‑149 (MQ=255)                                                                                                                              gTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCg                >  2:662235/1‑149 (MQ=255)                                                                                                                                        gCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGt                                                                                >  1:416520/1‑75 (MQ=255)                                                                                                                                        gCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGt                                                                                <  2:416520/75‑1 (MQ=255)                                                                                                                                            gCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGcc  >  2:17883/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                               ACGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCC  >  NC_000913_3_hsa_tpiA/3856763‑3857050

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.