New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 4372595	43 (1.110)	3 (0.080)	3/278	5.8	6.6%	coding (1589/1647 nt)	groL	Cpn60 chaperonin GroEL, large subunit of GroESL
	?	NC_000913_3_hsa_tpiA	= 4372605	44 (1.180)					coding (1599/1647 nt)	groL	Cpn60 chaperonin GroEL, large subunit of GroESL
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGA  >  NC_000913_3_hsa_tpiA/4372462‑4372743                                                                                                                                      |                                                                                                                                                     ggCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTGCCGACCGTCCGAAAAACGATGCAGCTGACTTAGGCgctgc                                                                                                                                       >  1:16464/1‑149 (MQ=255)    aaCATGATCGACATGGAAATCCTCGCTCCAACCAGAGTAACTCGTTCTGCTCTGCAGTACGCAGCGTCGGGGGCTGGCCTGATGCACACCACGCAATGCATCGTTACCGACCTGCCGTAAACCGCTGCAGCTGACTCACGCgctcatgc                                                                                                                                    >  2:61796/1‑144 (MQ=255)            cGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGTCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATgg                                                                                                                            <  2:538847/149‑1 (MQ=255)                         cTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGCCCCGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTgg                                                                                                               >  1:492546/1‑149 (MQ=255)                             aTCCAACCAAAGTAACTCGTTCTGCTCTGCAGGACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATg                                                                                                           <  1:154971/149‑1 (MQ=255)                              tCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATgg                                                                                                          >  1:430665/1‑149 (MQ=255)                              tCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGGGGCTTgg                                                                                                          >  1:22590/1‑149 (MQ=255)                                   ttaaaGGAACTCGTGTCGCCCGGCAGTATGCAGCTTCTGTGGCTGGCCCGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGATGGCGGTATGGGCGGCATGGGTGGCATGggcggc                                                                                                     <  2:194051/147‑1 (MQ=255)                                    caaAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCa                                                                                                    <  2:157395/149‑1 (MQ=255)                                    caaAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGAGGCAGCTGACTTATGCGCTGCTGGCGGTATGGGGGGCATGGGTGGCATGGGGGGCa                                                                                                    >  2:97139/1‑149 (MQ=255)                                      aaGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCatg                                                                                                  <  1:419448/149‑1 (MQ=255)                                            cTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGTTCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTaa                                                                                            >  2:543457/1‑149 (MQ=255)                                            cTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGACGGCCTGAGGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTaa                                                                                            <  1:353459/149‑1 (MQ=255)                                                  ctggccagcAGTACGCAGCTGCTGTGGCTGGCCGGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGccc                                                                                      <  2:99889/142‑1 (MQ=255)                                                             tACGCCGCTTCTGGGGCTGGCCGGTGGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCa                                                                           <  2:369824/149‑1 (MQ=255)                                                              aCGCAGCGTCTGTGGCAGGTCTGATTATCACAACCTAATGCATGGTTACCGACATGCAGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAg                                                                          <  2:522167/149‑1 (MQ=255)                                                                        tgtgGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCCCGCAGAAATaaacaa                                                                >  1:368178/1‑149 (MQ=255)                                                                         gtgGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATggg                                                                                                                           <  2:590240/89‑1 (MQ=255)                                                                         gtgGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATggg                                                                                                                           >  1:590240/1‑89 (MQ=255)                                                                              tggcCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGAATTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCTCTGCACCTCGCAGAAATaaacaaaacacc                                                          >  2:198432/1‑144 (MQ=255)                                                                                  cTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCCCCTCGCAGAAATAAACAAACCCCCGGGc                                                      >  2:295358/1‑149 (MQ=255)                                                                                             caccGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGACAGAAACAAACCCCCGGGCGGAAATGTCTg                                           >  2:370974/1‑149 (MQ=255)                                                                                                cGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTgggg                                        <  2:16464/149‑1 (MQ=255)                                                                                                  aaTGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCggg                                                       >  2:155734/1‑132 (MQ=255)                                                                                                  aaTGCATGGTTACCGACCTGCCGAAAAACGATGCAGATGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCggg                                                       <  1:155734/132‑1 (MQ=255)                                                                                                   aTGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGtt                                     >  1:488204/1‑149 (MQ=255)                                                                                                         ggTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAACCAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTcgt                               >  1:668542/1‑147 (MQ=255)                                                                                                         ggTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCtt                               <  1:111021/149‑1 (MQ=255)                                                                                                            tACCGACCTGGCGAAAAACGATGCAGTGGCCTCAGGAGCCGCTGGTGGTATGGGCGGCAGAGGGGGCATAGGGGGCATGATGTAAGTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTg                            <  2:60251/149‑1 (MQ=255)                                                                                                            tACCGACCGGCCGAAAAACGATGCAGCTGACCTAGGCGCTGCGGGAGGTACGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTCCCCTGCACTTCGCAGAAATAAACAAACCCCCGTGCTGAAATGTCTGGGGGTTTTTCTTTTg                            <  2:57389/149‑1 (MQ=255)                                                                                                            cgactagcTGCCGAAAGACGAGGCAGCTAGATTAGGCGCTGCTGGCGGTATGGGCTGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTg                            <  2:166586/142‑1 (MQ=255)                                                                                                             aCCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTgg                           <  1:397590/149‑1 (MQ=255)                                                                                                              ccGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAAGAGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGt                          <  1:97139/149‑1 (MQ=255)                                                                                                               cggccTGGCGAAAAAGGATGCAGCTGACTTAGGCGCGGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTc                         <  2:656605/146‑1 (MQ=255)                                                                                                                        gAAAAACGATGCAGCTTACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCTGGCATAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTa                <  1:513019/149‑1 (MQ=255)                                                                                                                        gAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTg                            >  2:507233/1‑137 (MQ=255)                                                                                                                        gAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTg                            <  1:507233/137‑1 (MQ=255)                                                                                                                         aaaaaCGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGGGGCATGGTGTGATTGCCGTGGACGTCGCAGGAATAAACAAACCCCCGGGCAGAGATGTCTGGGGGTTTTTATTTTGGTCTTCTTTCTAg               >  2:500520/1‑149 (MQ=255)                                                                                                                                 tGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGAt       >  1:595561/1‑149 (MQ=255)                                                                                                                                  gCAGCTGACTTAGGCGGTGGTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGAtt      <  2:424995/149‑1 (MQ=255)                                                                                                                                    aGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCa                                                                           <  2:633580/78‑1 (MQ=255)                                                                                                                                    aGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCa                                                                           >  1:633580/1‑78 (MQ=255)                                                                                                                                      cTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGa  >  1:226287/1‑149 (MQ=255)                                                                                                                                      |                                                                                                                                                     GGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGA  >  NC_000913_3_hsa_tpiA/4372462‑4372743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.