New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA = 437259543 (1.110)3 (0.080) 3/278 5.8 6.6% coding (1589/1647 nt) groL Cpn60 chaperonin GroEL, large subunit of GroESL
?NC_000913_3_hsa_tpiA = 4372605 44 (1.180)coding (1599/1647 nt) groL Cpn60 chaperonin GroEL, large subunit of GroESL
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGA  >  NC_000913_3_hsa_tpiA/4372462‑4372743
                                                                                                                                     |                                                                                                                                                    
ggCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTGCCGACCGTCCGAAAAACGATGCAGCTGACTTAGGCgctgc                                                                                                                                       >  1:16464/1‑149 (MQ=255)
   aaCATGATCGACATGGAAATCCTCGCTCCAACCAGAGTAACTCGTTCTGCTCTGCAGTACGCAGCGTCGGGGGCTGGCCTGATGCACACCACGCAATGCATCGTTACCGACCTGCCGTAAACCGCTGCAGCTGACTCACGCgctcatgc                                                                                                                                    >  2:61796/1‑144 (MQ=255)
           cGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGTCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATgg                                                                                                                            <  2:538847/149‑1 (MQ=255)
                        cTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGCCCCGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTgg                                                                                                               >  1:492546/1‑149 (MQ=255)
                            aTCCAACCAAAGTAACTCGTTCTGCTCTGCAGGACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATg                                                                                                           <  1:154971/149‑1 (MQ=255)
                             tCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATgg                                                                                                          >  1:430665/1‑149 (MQ=255)
                             tCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGGGGCTTgg                                                                                                          >  1:22590/1‑149 (MQ=255)
                                  ttaaaGGAACTCGTGTCGCCCGGCAGTATGCAGCTTCTGTGGCTGGCCCGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGATGGCGGTATGGGCGGCATGGGTGGCATGggcggc                                                                                                     <  2:194051/147‑1 (MQ=255)
                                   caaAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCa                                                                                                    <  2:157395/149‑1 (MQ=255)
                                   caaAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGAGGCAGCTGACTTATGCGCTGCTGGCGGTATGGGGGGCATGGGTGGCATGGGGGGCa                                                                                                    >  2:97139/1‑149 (MQ=255)
                                     aaGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCatg                                                                                                  <  1:419448/149‑1 (MQ=255)
                                           cTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGTTCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTaa                                                                                            >  2:543457/1‑149 (MQ=255)
                                           cTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGACGGCCTGAGGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTaa                                                                                            <  1:353459/149‑1 (MQ=255)
                                                 ctggccagcAGTACGCAGCTGCTGTGGCTGGCCGGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGccc                                                                                      <  2:99889/142‑1 (MQ=255)
                                                            tACGCCGCTTCTGGGGCTGGCCGGTGGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCa                                                                           <  2:369824/149‑1 (MQ=255)
                                                             aCGCAGCGTCTGTGGCAGGTCTGATTATCACAACCTAATGCATGGTTACCGACATGCAGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAg                                                                          <  2:522167/149‑1 (MQ=255)
                                                                       tgtgGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCCCGCAGAAATaaacaa                                                                >  1:368178/1‑149 (MQ=255)
                                                                        gtgGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATggg                                                                                                                           <  2:590240/89‑1 (MQ=255)
                                                                        gtgGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATggg                                                                                                                           >  1:590240/1‑89 (MQ=255)
                                                                             tggcCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGAATTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCTCTGCACCTCGCAGAAATaaacaaaacacc                                                          >  2:198432/1‑144 (MQ=255)
                                                                                 cTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCCCCTCGCAGAAATAAACAAACCCCCGGGc                                                      >  2:295358/1‑149 (MQ=255)
                                                                                            caccGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGACAGAAACAAACCCCCGGGCGGAAATGTCTg                                           >  2:370974/1‑149 (MQ=255)
                                                                                               cGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTgggg                                        <  2:16464/149‑1 (MQ=255)
                                                                                                 aaTGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCggg                                                       >  2:155734/1‑132 (MQ=255)
                                                                                                 aaTGCATGGTTACCGACCTGCCGAAAAACGATGCAGATGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCggg                                                       <  1:155734/132‑1 (MQ=255)
                                                                                                  aTGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGtt                                     >  1:488204/1‑149 (MQ=255)
                                                                                                        ggTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAACCAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTcgt                               >  1:668542/1‑147 (MQ=255)
                                                                                                        ggTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCtt                               <  1:111021/149‑1 (MQ=255)
                                                                                                           tACCGACCTGGCGAAAAACGATGCAGTGGCCTCAGGAGCCGCTGGTGGTATGGGCGGCAGAGGGGGCATAGGGGGCATGATGTAAGTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTg                            <  2:60251/149‑1 (MQ=255)
                                                                                                           tACCGACCGGCCGAAAAACGATGCAGCTGACCTAGGCGCTGCGGGAGGTACGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTCCCCTGCACTTCGCAGAAATAAACAAACCCCCGTGCTGAAATGTCTGGGGGTTTTTCTTTTg                            <  2:57389/149‑1 (MQ=255)
                                                                                                           cgactagcTGCCGAAAGACGAGGCAGCTAGATTAGGCGCTGCTGGCGGTATGGGCTGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTg                            <  2:166586/142‑1 (MQ=255)
                                                                                                            aCCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTgg                           <  1:397590/149‑1 (MQ=255)
                                                                                                             ccGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAAGAGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGt                          <  1:97139/149‑1 (MQ=255)
                                                                                                              cggccTGGCGAAAAAGGATGCAGCTGACTTAGGCGCGGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTc                         <  2:656605/146‑1 (MQ=255)
                                                                                                                       gAAAAACGATGCAGCTTACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCTGGCATAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTa                <  1:513019/149‑1 (MQ=255)
                                                                                                                       gAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTg                            >  2:507233/1‑137 (MQ=255)
                                                                                                                       gAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTg                            <  1:507233/137‑1 (MQ=255)
                                                                                                                        aaaaaCGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGGGGCATGGTGTGATTGCCGTGGACGTCGCAGGAATAAACAAACCCCCGGGCAGAGATGTCTGGGGGTTTTTATTTTGGTCTTCTTTCTAg               >  2:500520/1‑149 (MQ=255)
                                                                                                                                tGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGAt       >  1:595561/1‑149 (MQ=255)
                                                                                                                                 gCAGCTGACTTAGGCGGTGGTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGAtt      <  2:424995/149‑1 (MQ=255)
                                                                                                                                   aGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCa                                                                           <  2:633580/78‑1 (MQ=255)
                                                                                                                                   aGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCa                                                                           >  1:633580/1‑78 (MQ=255)
                                                                                                                                     cTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGa  >  1:226287/1‑149 (MQ=255)
                                                                                                                                     |                                                                                                                                                    
GGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGA  >  NC_000913_3_hsa_tpiA/4372462‑4372743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.