New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	1929001 =	43 (1.110)	3 (0.080)	3/266	5.6	6.8%	intergenic (‑162/+47)	ptrB/yebE	protease II/DUF533 family inner membrane protein
	?	NC_000913_3_hsa_tpiA	1929040 =	43 (1.200)					intergenic (‑201/+8)	ptrB/yebE	protease II/DUF533 family inner membrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AAACAGGGGAGTCATTGCTTAGATGATGACAGGTAATGGCGCGGATATCGAATGTTATGCAGACAGAGAAAATCAGCCTGTTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAGCGCGTCACCCAGTGCATTCAGGTAACTGCGTTCCATAAAATGGTCAATATCAATAGCCGCGCA  >  NC_000913_3_hsa_tpiA/1928903‑1929185                                                                                                                                          |                                                                                                                                                  aaaCCGGGGAGGCATGGTTTCGGTGATGGCAGGTAGTGGCGCGGATATCGAATGTTATGCAGACAGAGAAAATCAGCCTGTTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAattat                                                                                                                                        <  1:216131/149‑1 (MQ=255)       gggAGTCATTGCTTAGATGATGACAGGTAATGGCGCGGATATCGAATGTTATGCAGACAGAGAAAATCAGCCTGTTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCCGGCTATCCAGACAGCGGAATTATTCCggc                                                                                                                                  >  2:184911/1‑147 (MQ=255)       gggAGTCATTGCTTAGATGATGACAGGTAATGGCGCGGATATCGAATGTTATGCAGACAGAGAAAATCAGCCTGTTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGcc                                                                                                                                  >  2:612943/1‑149 (MQ=255)       gggAGTCATTGCTTAGATGATGACAGGTAATGGCGCGGATATCGAATGTTATGCAGACAGAGAAAATCAGCCTGTTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGGCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGcc                                                                                                                                  >  1:620329/1‑149 (MQ=255)       gggAGTCATTGCTTAGATGATGACAGGTAATGGCGCGGATATCGAATGTTATGCAGACAGAGAAAATCAGACTGTTCAAATGGCTGTGCGATTCTGTGTAGCCGGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGcc                                                                                                                                  >  1:106282/1‑149 (MQ=255)         gAGTCATTGCTTAGATGATGACAGGTAATGGCGCGGATATCGAATGTTATGCAGACAGAGAAAATCAGCCTGTTCAAATGGCTGTGCGATTCTGGGTAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCaa                                                                                                                                >  1:79817/1‑149 (MQ=255)              agtGCTTAGATGATGACAGGTGATGGCGCGGATATCGAATGTTATGCAGACAGAGAAAAGCAGCCTGTTCAAATGGCTGGGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGc                                                                                                                           <  2:238190/147‑1 (MQ=255)              aTTGCTTAGATGATGACAGGTAATGGCGCGGATATCGAATGTTATGCAGACAGAGAAAATCAGCCTGTTCAAATGGCTGTGCGATTCTCGATAGACCGAAATAGTCAACTTCCGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGc                                                                                                                           <  2:569677/149‑1 (MQ=255)                          atgaCAGGTAATGGCGCGGATATCGAATGTTATGCAGACAGAGAAAATCAGCCTGTTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGtt                                                                                                               <  1:612943/149‑1 (MQ=255)                             acgggTAATGGGGCGGAGATCGGATGTTATGCAGACAGAGAAAATCAGTCTGTTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGACAAAGTGCGTTTTTGCTGTTCga                                                                                                            <  1:142372/146‑1 (MQ=255)                             aCAGGTAACGGCGGGGATATCGAATGTTATGCAGACAGAGAAAATCAGCCTGTTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCga                                                                                                            <  1:224323/149‑1 (MQ=255)                               aGGTAATGTGGCGTATATATAATGTTTTGGAGAAAAATAAAAGCAGCCTGTTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCGATCCAGAGAGCGGAATTATTCCCCCAAAGTGCGTTTTTGCTGTTCgaga                                                                                                          <  2:205534/149‑1 (MQ=255)                               aGGTAATGGCGCGGATATCGAATGTTATGCAGACAGAGAAAATCAGCCTGTTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCgaga                                                                                                          >  2:335078/1‑149 (MQ=255)                                      tgcgcGTATAGCGGATGTTATGCAGACAGAGAAAATCAGCAGGTTCAAATGGCTGTGGGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGtt                                                                                                   <  1:416671/148‑1 (MQ=255)                                         gtggAAATCGAGTGTTATGCAGACAGAGAAAATCAGCCGATTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGGCAACTTATAGCTGCCCAGAGCGCGGAAGTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCaa                                                                                                <  1:599637/147‑1 (MQ=255)                                              tatCGAATGTTATGCAGACAGAGAAAATCAGCCTGTTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCg                                                                                           >  2:296035/1‑149 (MQ=255)                                                  gAATGTTATGCAGACAGAGAAAATCAGCCTGTTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCTCGTTCGCGTTCAATGCCGTCAc                                                                                       >  2:173194/1‑149 (MQ=255)                                                   aaTGTTATGCAGACAGAGAAAATCAGCCTGTTCAAATGGCTGTGCGATTCTGGATGGCCCGCAATAGTCAACGTCAGGCCATCCAGAGAGCGGAATTATTCCGCCAAAGAGCGCTTTTGCTGTTCGAGACGGCCGTCAATGCCGTccgc                                                                                      >  2:229294/1‑146 (MQ=255)                                                     tGTTATGCAGACAGAGAAAATCAGCCTGTTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGaa                                                                                    >  1:279218/1‑149 (MQ=255)                                                           gCAGACAGAGAAAATCAGCCTGTTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCt                                                                              <  2:432169/149‑1 (MQ=255)                                                              gacagaGAAAATCAGCCTGTTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTggg                                                                           <  1:335078/149‑1 (MQ=255)                                                                   agaAAATCAGCCTGTTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGAtc                                                                      <  2:514917/149‑2 (MQ=255)                                                                         gcAGCCTGTTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAgc                                                                <  1:300951/148‑1 (MQ=255)                                                                             ccTGTTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGAGCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAGCGCGt                                                            <  1:647117/149‑1 (MQ=255)                                                                             ccTGTTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCAGAATTATTCCGCCAAAGTGAGTTTTCGCTGTTCGCCATCGCGTTTAATGACGTCGCGAACATCCTGGGGGGTTTTCAgtccat                                                            >  2:240696/1‑144 (MQ=255)                                                                                   cAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAGCGCGTCACCCa                                                      <  1:296035/149‑1 (MQ=255)                                                                                    aaaTGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCaa                                                                                                <  1:524336/106‑1 (MQ=255)                                                                                    aaaTGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCaa                                                                                                >  2:524336/1‑106 (MQ=255)                                                                                    aaaTGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAGCGCGTCACCCAg                                                     >  1:364905/1‑149 (MQ=255)                                                                                         gCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAGCGCGTCACCCAGTGCAt                                                >  1:485784/1‑149 (MQ=255)                                                                                             tgCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAGCGCGTCACCCAGTGCATTCAg                                            >  1:111110/1‑149 (MQ=255)                                                                                               cGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCCGAATTATTCCTCCAAAGTGCGTTTTTGCCGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAGCGCGTCACCCAGTGCATTCAGGt                                          <  2:200928/149‑1 (MQ=255)                                                                                                      ggATAGCCGGAAAGAGGCAACGTCAGGCTATCCAGGGAGTGGAATTATTCCGGCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAGCGCGTCACCCAGTGCATTCAGGTAACTGCg                                   <  2:106282/149‑1 (MQ=255)                                                                                                             ccGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCg                                                                                           <  2:124248/86‑1 (MQ=255)                                                                                                             ccGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCg                                                                                           >  1:124248/1‑86 (MQ=255)                                                                                                             ccGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAGCGCGTCGCCCAGTGCATTCAGGTAACTGCGTTCCTTa                            >  1:73353/1‑149 (MQ=255)                                                                                                              cGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAGCGCGTCACCCAGTGCATTCAGGTAACTGCGTTCCATaa                           >  1:193323/1‑149 (MQ=255)                                                                                                               gAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGCACCTCCTGAGCGAATAACCACCCCTCCCACAGTACCTTCAGGGAACTGCGTTCCATaaa                          >  2:23734/1‑149 (MQ=255)                                                                                                                  aTAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAGCGCGTCACCCAGTGCATTCAGGTAACTGCGTTCCAAAAAATg                       >  1:239673/1‑149 (MQ=255)                                                                                                                    aGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAGCGCGTCACCCAGTGCATTCAGGTAACTGCGTTCCATAAAATGGt                     <  1:173194/149‑1 (MQ=255)                                                                                                                      tCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAGCGCGTCACCCAGTGCATTCAGGTAACTGCGTTCCATAACATGGtca                   >  1:52123/1‑149 (MQ=255)                                                                                                                         aCTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAGCGCGTCACCCAGTGCATTCAGGTAACTGCGTTCCATAAAATGGtcaata                <  1:471520/149‑1 (MQ=255)                                                                                                                             cAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAGCGCGTCACCCAGTGCATTCAGGTAACTGCGTTCCATAAAATGGtcaatatcaa            <  2:563389/149‑1 (MQ=255)                                                                                                                                gCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAGCGCGTCACCCAGTGCATTGAGGTAACTACGTTCCATAAAATGGTCAATCTCAATAg         >  1:68238/1‑149 (MQ=255)                                                                                                                                    tCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAGCGCGTCACCCAGTGCATTCAGGTAACTGCGTTCCATAAAATGGTCAATATCAATAGCcgc     <  2:485784/149‑1 (MQ=255)                                                                                                                                      cAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAGCGCGTCACCCAGTGCATTCAGGTAACTGCGTTCCATAAAATGGTCAATATCAATAGCCgcgc   >  2:47446/1‑149 (MQ=255)                                                                                                                                       agagagCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAGCGCGTCACCCACTGCATTCAGGTAACTGCGTTCCATAAAATGGTCAATATAAATTGCcccgat  >  2:641815/1‑147 (MQ=255)                                                                                                                                          |                                                                                                                                                  AAACAGGGGAGTCATTGCTTAGATGATGACAGGTAATGGCGCGGATATCGAATGTTATGCAGACAGAGAAAATCAGCCTGTTCAAATGGCTGTGCGATTCTGGATAGCCCGAAATAGTCAACTTCAGGCTATCCAGAGAGCGGAATTATTCCGCCAAAGTGCGTTTTTGCTGTTCGAGATCGCGTTCAATGCCGTCACGAACATCCTGGGGGATTTTCAGCGCGTCACCCAGTGCATTCAGGTAACTGCGTTCCATAAAATGGTCAATATCAATAGCCGCGCA  >  NC_000913_3_hsa_tpiA/1928903‑1929185

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.