| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_tpiA | = 1445179 | 15 (0.960) | 4 (0.280) | 4/230 | 1.4 | 22.3% | coding (2129/2640 nt) | ydbH | putative membrane‑anchored protein, function unknown |
| ? | NC_000913_3_pae_tpiA | = 1445190 | 14 (0.970) | coding (2140/2640 nt) | ydbH | putative membrane‑anchored protein, function unknown | |||||
CGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAATCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGCTGAACAATGAAAAATGGATTGTGAAAGA > NC_000913_3_pae_tpiA/1445050‑1445320 | cGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCtgttgcggc < 1:48346‑M2/150‑10 (MQ=255) ttACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAAtc > 3:62391/1‑150 (MQ=255) gCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAATCTCTCa < 2:32401/150‑1 (MQ=255) gTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGgc < 1:183310/109‑1 (MQ=255) gTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGgc > 2:183310/1‑109 (MQ=255) cGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAATCTCTCATCCAGCGAACTGGTTAGCGCCg < 4:62391/150‑1 (MQ=255) tGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAATCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATcc > 4:23487/1‑150 (MQ=255) cTTGCTGTTGACTGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACAgcgccgggtcatgttgcggcatacgtaattgtttc > 4:91038‑M1/1‑75 (MQ=255) cTTGCTGTTGACTGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACAgcgccgggtcatgttgcggcatacgtaattgtttc < 3:91038‑M1/110‑36 (MQ=255) tGTTGACTGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACAgcgccgggtcatgttgcgg > 3:117375‑M1/1‑70 (MQ=255) tGTTGACTGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACAgcgccgggtcatgttgcgg < 4:117375‑M1/89‑20 (MQ=255) tGACTGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAATCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCg < 2:48346/150‑1 (MQ=255) cGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAATCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGc < 2:21444/114‑1 (MQ=255) cGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAATCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGc > 1:21444/1‑114 (MQ=255) tACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAATCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATgg > 4:23007/1‑143 (MQ=255) tACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAATCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATgg < 3:23007/143‑1 (MQ=255) gaAACAATTACGTATGCCGCAACATGACCCGGCGCtgttgcggcatacgtaattgtttcatcagtacgttaccgcctaacacatcgacgctaacatcagtcaacagcaag > 4:91038‑M2/1‑35 (MQ=255) gaAACAATTACGTATGCCGCAACATGACCCGGCGCtgttgcggcatacgtaattgtttcatcagtacgttaccgcctaacacatcgacgctaacatcagtcaacagcaag < 3:91038‑M2/110‑76 (MQ=255) aCAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAATCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAgtggtg < 4:104513/119‑1 (MQ=255) aCAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAATCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAgtggtg > 3:104513/1‑119 (MQ=255) gCCGCAACAgcgccgggtcatgttgcggcatacgtaattgtttcatcagtacgttaccgcctaacacatcgacgctaacatcagtcaacagcaagggttcttcttcagtccacggataacgcccttgcaaatcagccgtaatatttttcg < 1:48346‑M1/150‑142 (MQ=255) ccGCAACATGACCCGGCGCtgttgcggcatacgtaattgtttcatcagtacgttaccgcctaacacatcgacgctaacatcagtcaaca < 4:117375‑M2/89‑71 (MQ=255) ccGCAACATGACCCGGCGCtgttgcggcatacgtaattgtttcatcagtacgttaccgcctaacacatcgacgctaacatcagtcaaca > 3:117375‑M2/1‑19 (MQ=255) cAACATGACCCGGCGCTGTTGCGGCTGAATAAtctct < 2:150992/37‑1 (MQ=255) cAACATGACCCGGCGCTGTTGCGGCTGAATAAtctct > 1:150992/1‑37 (MQ=255) | CGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAATCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGCTGAACAATGAAAAATGGATTGTGAAAGA > NC_000913_3_pae_tpiA/1445050‑1445320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |