New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA = 3380606110 (1.380)3 (0.040) 3/260 NT 2.7% intergenic (+17/‑137) yhcB/degQ DUF1043 family inner membrane‑anchored protein/serine endoprotease, periplasmic
?NC_000913_3_pae_tpiA = 3380611 108 (1.430)intergenic (+22/‑132) yhcB/degQ DUF1043 family inner membrane‑anchored protein/serine endoprotease, periplasmic
Rejected: Frequency below/above cutoff threshold.

Only 100 of 128 total aligned reads displayed.

GCTGAAGCAAACCCGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACGAGAGCAGGAATAATGAAAAAACAA  >  NC_000913_3_pae_tpiA/3380458‑3380754
                                                                                                                                                    |                                                                                                                                                    
 cttaaGCAAACCCGTTTCGTAATCGTGTGGCAGAGTCTGAAGCCAGCAACGGTCAGGCACCGGTGCAGATGGCTCGCGACTATTGTGAAGGCGCATCCGGCCTGCTGCGTGCTGGCGCGAAGCGCGACTCATTTATTTTTCGGGCGCAg                                                                                                                                                     >  2:204671/4‑149 (MQ=255)
    aaGCAAACCCGTTCCGTAATCGTCTGGCAGAGTCTCAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTACTTTATTTTTCGGCCGCCGCCa                                                                                                                                                  >  2:403112/1‑149 (MQ=255)
      gCAAACCCGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCAACGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGACGCGCGACTCATTGAGTTTTCGGGAGCAGCCagg                                                                                                                                                >  1:324058/1‑147 (MQ=255)
       cAAACCCGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATtg                                                                                                                                               <  2:284059‑M2/149‑3 (MQ=255)
          aCCCGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGGCTCGCGACTGTTATGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGGCTAATTTATTTTTCGGGGGCAGTCATtgagg                                                                                                                                            <  2:59863‑M2/149‑6 (MQ=255)
           cccGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATtgcgcc                                                                                                                                           >  1:743400‑M2/1‑143 (MQ=255)
             cGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCACGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCcct                                                                                                                                         >  1:1018232/1‑149 (MQ=255)
                     aaTCGTCTGGCCGAGTCTGAAGCCAGCAACGATCAGGCACCTGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCGGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAatggctgcgcccgaaaaataa                                                                                                                                 <  2:474501‑M1/149‑22 (MQ=255)
                     aaTCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCtcttct                                                                                                                                 <  1:1212493/149‑1 (MQ=255)
                      aTCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCAGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTtctc                                                                                                                                <  2:114813/149‑1 (MQ=255)
                        cGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTtctctc                                                                                                                              <  1:1056544/149‑1 (MQ=255)
                         ggcgggCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTctcc                                                                                                                             <  1:983208/145‑1 (MQ=255)
                         gTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAAATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTctcc                                                                                                                             <  1:1302986/149‑1 (MQ=255)
                            tGGCAGAGTCTGAGGCCAGCAACGATCAAGCACCGGTCCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGAATAATTGATTTTTCGGGCGCAGCNATTGCGCCCTCCTCTTCTctacctc                                                                                                                          >  1:933439/1‑149 (MQ=255)
                              gCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCtccctccc                                                                                                                        >  1:1304133/1‑149 (MQ=255)
                              gCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCtccctccc                                                                                                                        <  2:681203/149‑1 (MQ=255)
                              gCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGCCGCAGCCATTGCGCCCTCCTCTTCTCtccctccc                                                                                                                        >  1:992475/1‑149 (MQ=255)
                                 gagTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGa                                                                                                                     <  2:922811/149‑1 (MQ=255)
                                   gTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTACTTTTCGAGCGCAGCCATAGCGCCCTCCTCTTCTCTCCCTCCCCGACt                                                                                                                   >  2:932211/1‑149 (MQ=255)
                                    tCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTa                                                                                                                  >  2:1099131/1‑149 (MQ=255)
                                    tCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTa                                                                                                                  >  1:644351/1‑149 (MQ=255)
                                    tCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTa                                                                                                                  <  2:1138761/149‑1 (MQ=255)
                                      tGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCATGCTGCGTACTGGCTCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATc                                                                                                                >  2:362755/1‑149 (MQ=255)
                                            cAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACAATCATTTat                                                                                                          >  1:308609/1‑148 (MQ=255)
                                               cAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCt                                                                                                       <  1:1127633/149‑1 (MQ=255)
                                                aaCGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTg                                                                                                      <  1:798208/149‑1 (MQ=255)
                                                   gATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGgtg                                                                                                   <  1:1373611/149‑1 (MQ=255)
                                                             cGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGtt                                                                                         >  1:27640/1‑149 (MQ=255)
                                                             cGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGtt                                                                                         >  1:1372251/1‑149 (MQ=255)
                                                             cGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGtt                                                                                         <  2:343354/149‑1 (MQ=255)
                                                             cGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATGTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGtt                                                                                         >  2:800552/1‑149 (MQ=255)
                                                              ggTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTa                                                                                        <  1:1099131/149‑1 (MQ=255)
                                                              ggTGCAGATGCCTCGCGACGATTCTGAAGGCCCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATCTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTa                                                                                        <  2:839768/149‑1 (MQ=255)
                                                               gTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAg                                                                                       >  2:286213/1‑149 (MQ=255)
                                                               gTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAg                                                                                       >  2:777684/1‑149 (MQ=255)
                                                                tGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGc                                                                                      <  1:837050/149‑1 (MQ=255)
                                                                 gCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGcc                                                                                     <  1:284059/149‑1 (MQ=255)
                                                                 gCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGcc                                                                                     <  1:1165436/149‑1 (MQ=255)
                                                                     aTGCCTCGCGACTATTCTGAAGGCGCATGCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGAAGCCATTGCGTCATCCTCTTATCTCCCTTCCCGCCTATCCTTTAATCTGGTGTCTCATTGTTAGCCGTCt                                                                                 <  2:491590/149‑1 (MQ=255)
                                                                         cTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTTTCTTTGTTTGCCGTCTGaaa                                                                             >  1:1023623/1‑149 (MQ=255)
                                                                          tCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCCTTTAATCTGGTGTATCATTGTTAGCCGTCTGagaa                                                                            >  2:1236504/1‑149 (MQ=255)
                                                                          tCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCCCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTTTTAGCCGTCTGaaaa                                                                            >  2:438850/1‑149 (MQ=255)
                                                                            gcgACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAAtt                                                                          >  1:1005438/1‑149 (MQ=255)
                                                                            gcgACTATTCTGAAGGCGCATCCGGCCTGCTGCGGACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTATCTCCATCCACGACAATCATTTAATCCGATATGAAATTGTTAGCCATCTGAAAAtt                                                                          >  1:996787/1‑149 (MQ=255)
                                                                              gACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAatggctgcgcccgaaaaataaattagtcgcgcttcgcgccagta                                                                                                          <  2:981259‑M1/115‑45 (MQ=255)
                                                                              gACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAatggctgcgcccgaaaaataaattagtcgcgcttcgcgccagta                                                                                                          >  1:981259‑M1/1‑71 (MQ=255)
                                                                              gACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCa                                                                        >  1:366199/1‑149 (MQ=255)
                                                                               aCTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCaa                                                                       <  1:946941/149‑1 (MQ=255)
                                                                                 tATTCTGAAGGCGCATCCGGCCTGCTGCGCACTGGCATCAAGCGGGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTATCTCATTGTTAGCCGTCTGAAAATTCAATa                                                                     >  1:1045975/1‑149 (MQ=255)
                                                                                    tCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATGATTTAATCTGGTGTCTCATTTTTTGCCGTCTGAAAATTCAATaagc                                                                  >  2:133517/1‑147 (MQ=255)
                                                                                    tCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGCTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACa                                                                  >  2:133516/1‑149 (MQ=255)
                                                                                    ccTGAAGTCGTATCCCGCCTGCCTCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACa                                                                  <  2:831213/148‑1 (MQ=255)
                                                                                        aaGGCGCATCCTGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCaa                                                              <  2:826252/149‑1 (MQ=255)
                                                                                         aGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCaaa                                                             <  2:27640/149‑1 (MQ=255)
                                                                                          ggCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCAt                                                                                                              >  1:1139752/1‑99 (MQ=255)
                                                                                              cctCCGGCCGGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGtt                                                        <  1:662394/147‑1 (MQ=255)
                                                                                               gccctgCCTGCTGCGTCCGGGCGCCAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGttt                                                       <  2:1056546/144‑1 (MQ=255)
                                                                                                tCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGtttt                                                      <  1:1330530/149‑1 (MQ=255)
                                                                                                tCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGtttt                                                      >  2:893364/1‑149 (MQ=255)
                                                                                                tCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGtttt                                                      >  1:1113254/1‑149 (MQ=255)
                                                                                                 ccGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAAGATACAACTGTTTTg                                                     >  2:418982/1‑149 (MQ=255)
                                                                                                  cGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAACCTGTTTTGa                                                    >  1:336633/1‑149 (MQ=255)
                                                                                                  cGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGa                                                    >  2:1124280/1‑149 (MQ=255)
                                                                                                  cGGCCTGCGGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGa                                                    <  1:101784/149‑1 (MQ=255)
                                                                                                          tgcGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCttg                                            >  1:713225/1‑148 (MQ=255)
                                                                                                           gcGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATATCAGCAAACTGTTTTGAATCTCtttt                                           <  1:347935/149‑1 (MQ=255)
                                                                                                            cagtcTGGCGCGAATCGCGTGTAATTTATTTTTCGGGCGCAGCCATTGCGCGCGTCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTc                                          <  1:590080/145‑1 (MQ=255)
                                                                                                            cGTACTGGCTCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTc                                          <  1:820304/149‑1 (MQ=255)
                                                                                                            cGTACTGGCGTGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCGTCTCCTACTATCATTTAAGCTGTTTTCGCATTGTGAGCCGTCTGAGAATTCAATAACATCAAACTGTTTTGAATCTCTTTTc                                          <  2:1185651/149‑1 (MQ=255)
                                                                                                             gTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCt                                         <  1:571357/149‑1 (MQ=255)
                                                                                                                cTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTAt                                      <  2:1385248/149‑1 (MQ=255)
                                                                                                                cTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTAt                                      >  2:832915/1‑149 (MQ=255)
                                                                                                                cTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCAACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGACAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTAt                                      >  1:982962/1‑149 (MQ=255)
                                                                                                                 tGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCATCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAACCTGTTTTGATTTACTTTTTTTATc                                     >  1:498911/1‑149 (MQ=255)
                                                                                                                     gcgAAGCGCGACTAATTTATTTTTCGGGCGCAGCCCTTGCGCCCTCCTCTTCTCTCCCTCCCCGCCTATCCTTTAATCTGGTGTCTCATTGTTACCCGTCTGCAAATTCAATAACCTCAAACAGTTTTGAATCTATTTTCTTATCATTc                                 >  1:1356238/1‑149 (MQ=255)
                                                                                                                     gcgAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTc                                 >  2:764057/1‑149 (MQ=255)
                                                                                                                     gcgAAGCGCGACTAATTTATTTATCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTc                                 >  1:742695/1‑149 (MQ=255)
                                                                                                                      ctaaGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTGTCCCGCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCa                                <  2:866976/147‑1 (MQ=255)
                                                                                                                      cgAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCa                                <  2:41505/149‑1 (MQ=255)
                                                                                                                      cgAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCa                                <  1:1051371/149‑1 (MQ=255)
                                                                                                                      cgAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCa                                <  1:1051311/149‑1 (MQ=255)
                                                                                                                       gAAGCGCGACTACTTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAg                               <  1:1088268/149‑1 (MQ=255)
                                                                                                                       gAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAg                               <  2:478154/149‑1 (MQ=255)
                                                                                                                        aaGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAgg                              >  1:1300989/1‑149 (MQ=255)
                                                                                                                          gcgcGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTa                            >  1:538012/1‑149 (MQ=255)
                                                                                                                           cgcgACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTAc                           >  1:613416/1‑149 (MQ=255)
                                                                                                                           cgcgACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTAc                           >  2:195413/1‑149 (MQ=255)
                                                                                                                            gcgACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACg                          >  2:1168751/1‑149 (MQ=255)
                                                                                                                             cgACTAATTGATGTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCCCTCCCTCCCCGACTACCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACga                         <  2:724868/149‑1 (MQ=255)
                                                                                                                                cTAATTTACTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCAGACTATCATTTAATCTGGTGTCTCATGGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACGagag                      <  2:366286/149‑1 (MQ=255)
                                                                                                                                 tAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACGAGAGc                     >  1:70726/1‑149 (MQ=255)
                                                                                                                                   atttatttTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACGAGAGCAg                   <  1:507024/149‑1 (MQ=255)
                                                                                                                                   atttatttTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCCTCTGAAAATTCAATAACATCAAACTCGTTTGAGTATCTTTTCTTGTCGTTCAGGTGCCAGAGCAg                   >  2:766662/1‑149 (MQ=255)
                                                                                                                                     ttatttTTCGGGCGCAGCCATtgcgcccgaaaaataaattagtcgcgcttcgcgccagtacgccgcaggccggatgcgccttcagaatagtcgcgaggcatctgcacaggtgcctgatcgttgctggcttcagactcggccagacgatt                 <  2:474501‑M2/149‑129 (MQ=255)
                                                                                                                                       atttTTCGGGCGCAGCCATAGCGCCCTCCTCTTCTCTCACTCCCCGACTATCATTTAATCTGGTGTCTCCTTGTTAGCCGTCTGAAAATTCAATAAGATCAAACTGTTTTGAATCTCTTTTCTTATCATACAGTTACGGTAGCAGGaat               >  2:845507/1‑149 (MQ=255)
                                                                                                                                          gttCGCGCGCAGCCATTGCGCCCTCCTCGTCCCTCCCCCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACCGTTTTGAATCTCTTTTCTTATCATTCAGGTACGAGAGCAGGaataat            <  1:790548/148‑1 (MQ=255)
                                                                                                                                               ggCGCAatggctgcgcccgaaaaataaattagtcgcgcttcgcgccagtacgcagcaggccggatgcgccttcagaatagtcgcgaggcatctgcaccggtgcctgatcgttgctggcttcagactctgccagacgattacggaacggg       >  1:743400‑M1/1‑6 (MQ=255)
                                                                                                                                               ggCGCAGCCATTGCGCCTTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACGAGAGCAGGAATAATGaaaa       <  2:200574/149‑1 (MQ=255)
                                                                                                                                                   cAatggctgcgcccgaaaaataaattagtcgcgcttcgcgccagtacgcagcaggccggatgcgccttcagaatagtcgcgaggcatctgcaccggtgcctgatcgttgctggcttcagactctgccagacgattacggaacgggtttg   <  2:284059‑M1/149‑148 (MQ=255)
                                                                                                                                                    aGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACGAGAGCAGGAATAATGAAAaaacaa  <  1:629122/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GCTGAAGCAAACCCGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACGAGAGCAGGAATAATGAAAAAACAA  >  NC_000913_3_pae_tpiA/3380458‑3380754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.