New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA = 3380606110 (1.380)3 (0.040) 3/260 NT 2.7% intergenic (+17/‑137) yhcB/degQ DUF1043 family inner membrane‑anchored protein/serine endoprotease, periplasmic
?NC_000913_3_pae_tpiA = 3380611 108 (1.430)intergenic (+22/‑132) yhcB/degQ DUF1043 family inner membrane‑anchored protein/serine endoprotease, periplasmic
Rejected: Frequency below/above cutoff threshold.

Only 100 of 124 total aligned reads displayed.

CAAACCCGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACGAGAGCAGGAATAATGAAAAAACAAACCCA  >  NC_000913_3_pae_tpiA/3380465‑3380759
                                                                                                                                                   |                                                                                                                                                    
cAAACCCGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATtg                                                                                                                                                    <  2:284059‑M2/149‑3 (MQ=255)
    cccGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATtgcgcc                                                                                                                                                >  1:743400‑M2/1‑143 (MQ=255)
      cGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCACGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCcct                                                                                                                                              >  1:1018232/1‑149 (MQ=255)
       gTTCTGTAATCGCTTGGCAGATTCTGAAGCAAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCcctc                                                                                                                                             <  2:893659/149‑1 (MQ=255)
       gTTCCGCAATCCTCTGGCAGAGTCTGAAGCCAGCAACGACCAGGCACCGGTGCAGATGCCTCGCGACTATTCCGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCcctc                                                                                                                                             <  1:401099/149‑1 (MQ=255)
        ttCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCcctcc                                                                                                                                            >  1:1304723/1‑149 (MQ=255)
              aaTCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCtcttct                                                                                                                                      <  1:1212493/149‑1 (MQ=255)
               aTCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCAGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTtctc                                                                                                                                     <  2:114813/149‑1 (MQ=255)
                 cGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTtctctc                                                                                                                                   <  1:1056544/149‑1 (MQ=255)
                  gTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAAATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTctcc                                                                                                                                  <  1:1302986/149‑1 (MQ=255)
                    cTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTctccct                                                                                                                                <  2:1196591/149‑1 (MQ=255)
                     tGGCAGAGTCTGAGGCCAGCAACGATCAAGCACCGGTCCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑AATAATTGATTTTTCGGGCGCAGCNATTGCGCCCTCCTCTTCTctacctc                                                                                                                               >  1:933439/1‑149 (MQ=255)
                      ggCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTTCTCGCTTGAAGGGCGTAGTGCTTGA‑TTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTctccctcc                                                                                                                              <  1:1403584/149‑1 (MQ=255)
                       gCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCtccctccc                                                                                                                             <  2:681203/149‑1 (MQ=255)
                       gCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCtccctccc                                                                                                                             >  1:1304133/1‑149 (MQ=255)
                       gCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGCCGCAGCCATTGCGCCCTCCTCTTCTCtccctccc                                                                                                                             >  1:992475/1‑149 (MQ=255)
                          gagTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGa                                                                                                                          <  2:922811/149‑1 (MQ=255)
                            gTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTACTTTTCGAGCGCAGCCATAGCGCCCTCCTCTTCTCTCCCTCCCCGACt                                                                                                                        >  2:932211/1‑149 (MQ=255)
                             tCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTa                                                                                                                       <  2:1138761/149‑1 (MQ=255)
                             tCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTa                                                                                                                       >  1:644351/1‑149 (MQ=255)
                               tGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCATGCTGCGTACTGGCTCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATc                                                                                                                     >  2:362755/1‑149 (MQ=255)
                                     cAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACAATCATTTat                                                                                                               >  1:308609/1‑148 (MQ=255)
                                        cAACGATCAGTCACCGGTGCAGATGCCTCGCTACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGTGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCt                                                                                                            <  2:36837/149‑1 (MQ=255)
                                        cAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCt                                                                                                            <  1:1127633/149‑1 (MQ=255)
                                         aaCGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTg                                                                                                           <  1:798208/149‑1 (MQ=255)
                                            gATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGgtg                                                                                                        <  1:1373611/149‑1 (MQ=255)
                                            gATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCCTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCACCGCCTATCATTTCATctgctg                                                                                                        >  2:326706/1‑149 (MQ=255)
                                            gATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTCCCGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTGTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAGTCTggcg                                                                                                        >  1:778744/1‑147 (MQ=255)
                                                      cGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGtt                                                                                              >  1:1372251/1‑149 (MQ=255)
                                                      cGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGtt                                                                                              >  1:27640/1‑149 (MQ=255)
                                                      cGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATGTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGtt                                                                                              >  2:800552/1‑149 (MQ=255)
                                                       ggTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTa                                                                                             <  1:1099131/149‑1 (MQ=255)
                                                       ggTGCAGATGCCTCGCGACGATTCTGAAGGCCCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATCTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTa                                                                                             <  2:839768/149‑1 (MQ=255)
                                                        gTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAg                                                                                            >  2:777684/1‑149 (MQ=255)
                                                        gTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAg                                                                                            >  2:286213/1‑149 (MQ=255)
                                                         tGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGc                                                                                           <  1:837050/149‑1 (MQ=255)
                                                          gCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGcc                                                                                          <  1:1165436/149‑1 (MQ=255)
                                                          gCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGcc                                                                                          <  1:284059/149‑1 (MQ=255)
                                                              aTGCCTCGCGACTATTCTGAAGGCGCATGCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGAAGCCATTGCGTCATCCTCTTATCTCCCTTCCCGCCTATCCTTTAATCTGGTGTCTCATTGTTAGCCGTCt                                                                                      <  2:491590/149‑1 (MQ=255)
                                                                  cTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTTTCTTTGTTTGCCGTCTGaaa                                                                                  >  1:1023623/1‑149 (MQ=255)
                                                                   tCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCTCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTATCTCCCTCCCCGACTATCATTTACTCTGGTGGTTCATTGTTAGCCGTCTGaaaa                                                                                 >  2:1044623/1‑149 (MQ=255)
                                                                   tCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCCTTTAATCTGGTGTATCATTGTTAGCCGTCTGagaa                                                                                 >  2:1236504/1‑149 (MQ=255)
                                                                   tCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGaaaa                                                                                 >  1:1087667/1‑149 (MQ=255)
                                                                   tCGCGACTACTCTGAAGGCGCATCCGGCCTGCTGCGTCCTGGCGCGAAGCGCG‑ACTAATTTATTTTATGGTCTCAGGCATTGCGCGCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGaaaa                                                                                 <  1:1038010/149‑1 (MQ=255)
                                                                     gcgACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAAtt                                                                               >  1:1005438/1‑149 (MQ=255)
                                                                     gcgACTATTCTGAAGGCGCATCCGGCCTGCTGCGGACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTATCTCCATCCACGACAATCATTTAATCCGATATGAAATTGTTAGCCATCTGAAAAtt                                                                               >  1:996787/1‑149 (MQ=255)
                                                                       gACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCa                                                                             >  1:366199/1‑149 (MQ=255)
                                                                        aCTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCaa                                                                            <  1:946941/149‑1 (MQ=255)
                                                                             tCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGCTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACa                                                                       >  2:133516/1‑149 (MQ=255)
                                                                              cTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGACAATTCAATATCAt                                                                      >  2:750324/1‑149 (MQ=255)
                                                                               tGAAGTCGCATCCAGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATc                                                                     <  2:833132/149‑1 (MQ=255)
                                                                                 aaGGCGCATCCTGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCaa                                                                   <  2:826252/149‑1 (MQ=255)
                                                                                  aGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCaaa                                                                  <  2:27640/149‑1 (MQ=255)
                                                                                   ggCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCAt                                                                                                                   >  1:1139752/1‑99 (MQ=255)
                                                                                   ggCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCAt                                                                                                                   <  2:1139752/99‑1 (MQ=255)
                                                                                       cctCCGGCCGGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGtt                                                             <  1:662394/147‑1 (MQ=255)
                                                                                        gccctgCCTGCTGCGTCCGGGCGCCAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGttt                                                            <  2:1056546/144‑1 (MQ=255)
                                                                                         tCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGtttt                                                           >  1:1113254/1‑149 (MQ=255)
                                                                                         tCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGtttt                                                           >  2:893364/1‑149 (MQ=255)
                                                                                          ccGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAAGATACAACTGTTTTg                                                          >  2:418982/1‑149 (MQ=255)
                                                                                           cGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAACCTGTTTTGa                                                         >  1:336633/1‑149 (MQ=255)
                                                                                           cGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGa                                                         >  2:1124280/1‑149 (MQ=255)
                                                                                           cGGCCTGCGGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGa                                                         <  1:101784/149‑1 (MQ=255)
                                                                                                tgctgcGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCATCCTGTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCGCACTGTTTTGAAcctc                                                    >  2:804753/1‑149 (MQ=255)
                                                                                                     cagtcTGGCGCGAATCGCG‑TGTAATTTATTTTTCGGGCGCAGCCATTGCGCGCGTCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTc                                               <  1:590080/145‑1 (MQ=255)
                                                                                                     cGTACTGGCTCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTc                                               <  1:820304/149‑1 (MQ=255)
                                                                                                     cGTACTGGCGTGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCGTCTCCTACTATCATTTAAGCTGTTTTCGCATTGTGAGCCGTCTGAGAATTCAATAACATCAAACTGTTTTGAATCTCTTTTc                                               <  2:1185651/149‑1 (MQ=255)
                                                                                                      gTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCt                                              <  1:571357/149‑1 (MQ=255)
                                                                                                       tACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATtgcgcccgaaaaataaattagtcgcgcttcgcgccagtacgcagcaggccggatgcgccttcagaatagtc                                                                               >  1:981259‑M2/1‑44 (MQ=255)
                                                                                                         cTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTAt                                           <  2:1385248/149‑1 (MQ=255)
                                                                                                         cTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTAt                                           >  2:832915/1‑149 (MQ=255)
                                                                                                         cTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCAACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGACAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTAt                                           >  1:982962/1‑149 (MQ=255)
                                                                                                          tGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATc                                          <  2:1388245/149‑1 (MQ=255)
                                                                                                          tGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCATCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAACCTGTTTTGATTTACTTTTTTTATc                                          >  1:498911/1‑149 (MQ=255)
                                                                                                              gcgAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCCTTGCGCCCTCCTCTTCTCTCCCTCCCCGCCTATCCTTTAATCTGGTGTCTCATTGTTACCCGTCTGCAAATTCAATAACCTCAAACAGTTTTGAATCTATTTTCTTATCATTc                                      >  1:1356238/1‑149 (MQ=255)
                                                                                                              gcgAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTc                                      >  2:764057/1‑149 (MQ=255)
                                                                                                              gcgAAGCGCG‑ACTAATTTATTTATCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTc                                      >  1:742695/1‑149 (MQ=255)
                                                                                                               cgAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCa                                     <  1:1051371/149‑1 (MQ=255)
                                                                                                               cgAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCa                                     <  1:1051311/149‑1 (MQ=255)
                                                                                                               cgAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCa                                     <  2:41505/149‑1 (MQ=255)
                                                                                                                gAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAg                                    <  2:478154/149‑1 (MQ=255)
                                                                                                                 aaGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAgg                                   >  1:1300989/1‑149 (MQ=255)
                                                                                                                   gcgcG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTa                                 <  1:738003/149‑1 (MQ=255)
                                                                                                                    cgcg‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTAc                                >  2:195413/1‑149 (MQ=255)
                                                                                                                    cgcg‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTAc                                >  1:613416/1‑149 (MQ=255)
                                                                                                                      cg‑ACTAATTTATTTTTCGTGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACga                              <  2:45900/149‑1 (MQ=255)
                                                                                                                      cg‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACga                              <  1:639181/149‑1 (MQ=255)
                                                                                                                      cg‑ACTAATTGATGTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCCCTCCCTCCCCGACTACCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACga                              <  2:724868/149‑1 (MQ=255)
                                                                                                                          cTAATTTACTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCAGACTATCATTTAATCTGGTGTCTCATGGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACGagag                           <  2:366286/149‑1 (MQ=255)
                                                                                                                           tAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACGAGAGc                          >  1:70726/1‑149 (MQ=255)
                                                                                                                             atttatttTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACGAGAGCAg                        <  1:507024/149‑1 (MQ=255)
                                                                                                                              tttatttTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCGATAACATCAAACTTTTTTGAATCTCTTTTCTTATCATTCAGGTACGGGAGCAgg                       >  1:586895/1‑149 (MQ=255)
                                                                                                                               ttatttTTCGGGCGCAGCCATtgcgcccgaaaaataaattagtcgcgcttcgcgccagtacgccgcaggccggatgcgccttcagaatagtcgcgaggcatctgcacaggtgcctgatcgttgctggcttcagactcggccagacgatt                      <  2:474501‑M2/149‑129 (MQ=255)
                                                                                                                                 atttTTCGGGCGCAGCCATAGCGCCCTCCTCTTCTCTCACTCCCCGACTATCATTTAATCTGGTGTCTCCTTGTTAGCCGTCTGAAAATTCAATAAGATCAAACTGTTTTGAATCTCTTTTCTTATCATACAGTTACGGTAGCAGGaat                    >  2:845507/1‑149 (MQ=255)
                                                                                                                                        gggCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACGAGAGCAGGAATAATGaaa             <  1:321367/149‑1 (MQ=255)
                                                                                                                                         ggCGCAGCCATTGCGCCTTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACGAGAGCAGGAATAATGaaaa            <  2:200574/149‑1 (MQ=255)
                                                                                                                                               gCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGCTCAGCCGGTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACGAGAGCAGGAATAATGAAAaaacaaa      <  1:1104019/149‑1 (MQ=255)
                                                                                                                                                ccATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACGAGAGCAGGAATAATGAAAaaacaaac     <  1:1125388/149‑1 (MQ=255)
                                                                                                                                                   ttGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACGAGAGCAGGAATAATGAAAAAACAAACCCa  >  1:9467/1‑149 (MQ=255)
                                                                                                                                                   ttGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACGAGAGCAGGAATAATGAAAAAACAAACCCa  <  1:796769/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
CAAACCCGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCG‑ACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAAATTCAATAACATCAAACTGTTTTGAATCTCTTTTCTTATCATTCAGGTACGAGAGCAGGAATAATGAAAAAACAAACCCA  >  NC_000913_3_pae_tpiA/3380465‑3380759

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.