| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,737,118 | IS1 (+) +8 bp | intergenic (+235/‑29) | bamD → / → raiA | outer membrane protein assembly factor BamD/stationary phase translation inhibitor and ribosome stability factor |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1978503 = | NA (NA) | 24 (0.750) | 21/160 | 0.6 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 2737118 = | 0 (0.000) | intergenic (+235/‑36) | bamD/raiA | outer membrane protein assembly factor BamD/stationary phase translation inhibitor and ribosome stability factor | |||||
| * | ? | NC_000913 | = 1979270 | NA (NA) | 28 (0.880) | 23/160 | 0.4 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 2737125 | 0 (0.000) | intergenic (+242/‑29) | bamD/raiA | outer membrane protein assembly factor BamD/stationary phase translation inhibitor and ribosome stability factor | |||||
AAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1978581‑1978503‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGAACATTACCAGCAAACAAATGGAAATTACTCC > NC_000913/2737118‑2737194 AAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG < 2:210026/80‑1 AAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAA > 1:689104/1‑81 ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATT > 1:503592/1‑81 ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATT < 1:689105/81‑1 GTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACC < 2:361536/81‑1 GAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAG < 2:361554/81‑1 CTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACG < 2:4129/81‑1 TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGG > 2:503590/1‑81 CATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGA < 2:4116/81‑1 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAAT < 1:56282/81‑1 ATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTA > 1:503591/1‑81 ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGA > 1:503600/1‑81 AACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATG < 1:60778/81‑1 AACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAA < 1:209970/79‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGA < 1:4130/81‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGA < 2:60777/81‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGA < 2:4123/81‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATG > 2:503594/1‑80 CACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGAACATTACC < 2:4107/81‑1 ACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGAACATTAC > 1:503606/1‑79 TCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGAACATTACCAGCAA < 1:689068/81‑1 ATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGAACATTACCAGCAAAC > 1:503596/1‑80 GTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGAACATTACCAGCAAACAAATG < 2:689071/81‑1 ACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGAACATTACCAGCAAACAAATGGAAATTACTCC < 2:503572/80‑1 AAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1978581‑1978503‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGAACATTACCAGCAAACAAATGGAAATTACTCC > NC_000913/2737118‑2737194 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |