| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,737,118 | IS1 (+) +8 bp | intergenic (+235/‑29) | bamD → / → raiA | outer membrane protein assembly factor BamD/stationary phase translation inhibitor and ribosome stability factor |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1978503 = | NA (NA) | 24 (0.750) | 21/160 | 0.6 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 2737118 = | 0 (0.000) | intergenic (+235/‑36) | bamD/raiA | outer membrane protein assembly factor BamD/stationary phase translation inhibitor and ribosome stability factor | |||||
| * | ? | NC_000913 | = 1979270 | NA (NA) | 28 (0.880) | 23/160 | 0.4 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 2737125 | 0 (0.000) | intergenic (+242/‑29) | bamD/raiA | outer membrane protein assembly factor BamD/stationary phase translation inhibitor and ribosome stability factor | |||||
GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1979191‑1979270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAATCTCATAATTTTGTCACTTTTTGTC < NC_000913/2737125‑2737056 GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCG < 2:64047/81‑1 GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAA < 1:688987/81‑1 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTTAATCAGTAAGTTGGCAGCATCACCGTGAATT > 2:503541/1‑81 AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAG > 1:503530/1‑80 GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCA < 1:361609/81‑1 AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCAT < 2:64028/81‑1 CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACC < 1:361606/81‑1 CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACC < 2:56291/81‑1 CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACC > 1:503540/1‑81 AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCG < 1:4199/81‑1 GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGT < 2:688990/81‑1 CACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTG < 1:209930/81‑1 CACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTG < 2:56337/81‑1 GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGT > 2:503571/1‑81 GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATG < 1:60880/79‑1 AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCA < 1:64023/81‑1 AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCA < 1:688980/81‑1 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAA < 2:361632/81‑1 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGT < 1:209922/81‑1 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGT < 1:361623/79‑1 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGT < 1:361617/79‑1 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAA < 1:688957/81‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAATCTC < 1:209932/81‑1 CACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAATCTCATA < 2:60883/81‑1 TAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAATCTCATAATTTTGTCACT > 2:503570/1‑81 TTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAATCTCATAATTTTGTCACTTTTT < 1:688966/81‑1 GCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAATCTCATAATTTTGTCACTTTTTGTC < 1:361621/81‑1 CAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAATCTCATAATTTTGTCACTTTTTGTC > 1:503569/1‑80 GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1979191‑1979270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAATCTCATAATTTTGTCACTTTTTGTC < NC_000913/2737125‑2737056 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |