mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,946,819 | 0 | A | T | 69.2% | 32.9 / 20.5 | 26 | E190V (GAA→GTA) | yebB | putative papain‑like amidase YebB |
| * | NC_000913 | 1,985,528 | 0 | C | T | 66.7% | 24.2 / 19.3 | 24 | D201N (GAC→AAC) | araF | arabinose ABC transporter periplasmic binding protein |
| * | NC_000913 | 912,022 | 0 | T | A | 56.4% | 11.1 / 53.1 | 39 | A43A (GCA→GCT) | hcr | NADH oxidoreductase |
| * | NC_000913 | 2,876,039 | 0 | C | A | 48.1% | 3.7 / 38.6 | 27 | A97A (GCG→GCT) | cysD | sulfate adenylyltransferase subunit 2 |
| * | NC_000913 | 638,681 | 0 | G | A | 36.8% | 12.7 / 16.4 | 19 | intergenic (‑108/‑264) | dsbG/ahpC | protein sulfenic acid reductase DsbG/alkyl hydroperoxide reductase, AhpC component |
| * | NC_000913 | 3,596,105 | 0 | C | A | 34.4% | 44.0 / 28.5 | 32 | R100L (CGT→CTT) | livH | branched chain amino acid/phenylalanine ABC transporter membrane subunit LivH |
| * | NC_000913 | 3,533,541 | 0 | G | T | 34.3% | 53.2 / 30.8 | 35 | D242Y (GAT→TAT) | pck | phosphoenolpyruvate carboxykinase (ATP) |
| * | NC_000913 | 228,995 | 0 | C | A | 30.4% | 41.5 / 17.2 | 23 | noncoding (68/77 nt) | aspU | tRNA‑Asp |
| * | NC_000913 | 4,418,594 | 0 | A | T | 26.1% | 39.1 / 13.1 | 23 | I344I (ATT→ATA) | ulaG | L‑ascorbate‑6‑phosphate lactonase |
| * | NC_000913 | 4,296,060 | 0 | C | T | 25.8% | 113.1 / 40.2 | 62 | intergenic (+266/+376) | gltP/yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |