| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,291,610 | IS3 (–) +5 bp :: +T | coding (270‑274/1092 nt) | yraK → | putative fimbrial adhesin YraK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 315229 = | NA (NA) | 41 (1.160) +T |
31/158 | 0.2 | 100% | noncoding (1/1255 nt) | IS3 | repeat region |
| ? | NC_000913 | 3291610 = | 0 (0.000) | coding (270/1092 nt) | yraK | putative fimbrial adhesin YraK | |||||
| * | ? | NC_000913 | = 2171428 | NA (NA) | 44 (1.230) | 32/160 | 0.2 | 100% | noncoding (1258/1258 nt) | IS3 | repeat region |
| ? | NC_000913 | = 3291614 | 0 (0.000) | coding (274/1092 nt) | yraK | putative fimbrial adhesin YraK | |||||
GATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/315307‑315229‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTC > NC_000913/3291610‑3291686 | GATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGAT < 2:76408/80‑1GATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGAT < 2:417264/80‑1 ATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATC < 1:110793/80‑1 ATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGAT > 1:110764/1‑79 ATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGAT > 2:210422/1‑79 CTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACT < 1:210393/80‑1 CTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACT < 1:210394/80‑1 GTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGA > 2:647542/1‑81 GTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGA > 1:647555/1‑81 TTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGAC < 2:110797/81‑1 TTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGA > 2:647547/1‑80 TGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAG < 1:110785/81‑1 GTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAG > 2:647565/1‑80 GTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAG > 2:647584/1‑80 ACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTA > 2:647550/1‑80 GACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGACCACTGGACATCAGACAGGATATTACAAACT > 2:647551/1‑80 ACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCA < 2:417256/81‑1 ACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTC < 2:210363/80‑1 ACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTC > 1:647576/1‑80 ACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTC < 1:110790/80‑1 GAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGA > 1:647567/1‑80 GAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGAAATCAGACAGGATATTACAAACTCAATGA > 2:647574/1‑80 AGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGA > 2:647575/1‑79 TTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGC < 1:60968/81‑1 TTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCC > 1:647561/1‑81 ACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTG > 1:647578/1‑81 ACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCT < 2:417275/80‑1 CTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGG < 2:110800/81‑1 CTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTG < 1:76347/80‑1 ACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATA > 2:647562/1‑81 ACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGA < 2:110781/79‑1 AGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTA < 1:210361/80‑1 AGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTA > 1:647568/1‑80 GTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCAC < 1:210369/81‑1 GTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCAC < 1:60958/81‑1 TGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACA > 1:647564/1‑81 TCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATT < 1:110789/81‑1 TCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATT < 1:60992/81‑1 TCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATT < 1:210352/81‑1 TATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGG > 1:647579/1‑81 TATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGG > 1:647572/1‑81 TGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCA > 2:647559/1‑80 AAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATT > 1:647577/1‑81 AGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTC < 1:647524/81‑1 ATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTC > 2:647573/1‑79 | GATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/315307‑315229‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTC > NC_000913/3291610‑3291686 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |