| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,917,504 | Δ28 bp | coding (735‑762/864 nt) | atpG ← | ATP synthase F1 complex subunit gamma |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3917504 | 3917531 | 28 | 42 [0] | [0] 42 | atpG | ATP synthase F1 complex subunit gamma |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3917503 | 0 (0.000) | 39 (1.130) | 37/154 | 0.1 | 100% | coding (763/864 nt) | atpG | ATP synthase F1 complex subunit gamma |
| ? | NC_000913 | 3917532 = | 0 (0.000) | coding (734/864 nt) | atpG | ATP synthase F1 complex subunit gamma | |||||
GAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3917421‑3917503‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCA > NC_000913/3917532‑3917610 GAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTG > 2:842360/1‑81 GACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCC < 2:842311/81‑1 CGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCAC < 2:842312/81‑1 GATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCAC > 2:842361/1‑80 TCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCACCA > 2:842368/1‑80 GGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGG > 2:842358/1‑81 GGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATA < 2:842313/78‑1 GTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGGG > 2:842372/1‑81 GTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGGG < 2:842314/81‑1 GAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGGGCG > 2:842367/1‑81 AGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGGGCGG > 1:842356/1‑81 GTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGGGCGGC < 1:842315/81‑1 CTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGC > 2:842373/1‑81 CTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGC > 1:842365/1‑81 AGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGCTC < 2:842316/80‑1 CTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCC < 1:842317/80‑1 TGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTT > 1:842357/1‑81 ACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTC > 1:842355/1‑80 GAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAAC > 1:842371/1‑81 AGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACC < 2:842318/81‑1 AGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAAC > 2:842362/1‑80 GCTTTGTTGTATATCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCA < 2:842319/81‑1 TTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGC > 1:842390/1‑81 GTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCC > 2:842366/1‑81 TTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCT > 1:842381/1‑81 TATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGAT < 1:842320/81‑1 TATACCAACTGCAGCTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGA < 1:842328/80‑1 TACCAACTGCAGCTCTTTAATAAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAA < 2:842323/81‑1 AACTGCAGCTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCT > 1:842379/1‑81 GCAGCTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCT > 1:842376/1‑77 AGCTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATT < 1:842321/81‑1 AGCTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATT > 1:842370/1‑81 GCTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTC < 2:842322/81‑1 CTCTTTAATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCG < 2:842326/81‑1 TAATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACAT < 2:842325/80‑1 TAATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACAT < 1:842327/80‑1 AATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAA > 2:842386/1‑81 ATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAAC < 2:842324/81‑1 ATCAGGCTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAAC > 2:842394/1‑81 CTGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACG > 1:842387/1‑79 TGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAG > 2:842375/1‑81 GCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGC > 1:842389/1‑81 CCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCA < 2:842329/81‑1 GAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3917421‑3917503‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCA > NC_000913/3917532‑3917610 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |