New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5914157 =	44 (0.790)	6 (0.140)	6/220	5.7	16.4%	intergenic (+49/+104)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	5914253 =	26 (0.590)					intergenic (+145/+8)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG  >  NC_002947/5914013‑5914303                                                                                                                                                  |                                                                                                                                                      aTCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGccc                                                                                                                                                   <  4:313481/149‑1 (MQ=255)   cGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCctc                                                                                                                                                 >  5:202929/1‑149 (MQ=255)                gcgTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACg                                                                                                                                    <  7:46683/148‑1 (MQ=255)                  gTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGccc                                                                                                                                 <  1:291086/149‑1 (MQ=255)                       aGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTcc                                                                                                                            <  4:32892/149‑1 (MQ=255)                        ggAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTccc                                                                                                                           <  5:305935/149‑1 (MQ=255)                           aaGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCg                                                                                                                          >  1:320432/1‑147 (MQ=255)                           aaGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCa                                                                                                                        <  6:33969/149‑1 (MQ=255)                             gCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCTCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAgg                                                                                                                      <  1:227174/149‑1 (MQ=255)                              cGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAggg                                                                                                                     <  2:320432/149‑1 (MQ=255)                              cGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGACCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCACAgg                                                                                                                      >  7:42882/1‑148 (MQ=255)                                      aaGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑Tc                                                                                                            >  7:326671/1‑148 (MQ=255)                                           ttCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAgg                                                                                                       >  2:124193/1‑148 (MQ=255)                                           ttCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACCCCCGCTCCCCCAGGGTAATT‑‑TCGAAGGc                                                                                                      >  6:113311/1‑149 (MQ=255)                                            tCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAGGCt                                                                                                     >  3:130432/1‑149 (MQ=255)                                                 cACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAGGCTGAAGc                                                                                                <  6:202929/149‑1 (MQ=255)                                                  aCTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAGGCTGAAGcc                                                                                               >  7:95100/1‑149 (MQ=255)                                                    tCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAGGCTGAAGCCtg                                                                                             >  6:131422/1‑149 (MQ=255)                                                      gATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACCCCCGCTCCCCCAGGGTAATT‑‑TAGAAAGCTGAAggcctg                                                                                            >  4:203721/1‑143 (MQ=255)                                                          tcCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAGGCTGAAGCCt                                                                                              <  7:267434/142‑1 (MQ=255)                                                          tcCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACCCCCGCGCCCGCAGGGTAATT‑‑TCGAAGGCTGAAGCCAGTGAca                                                                                        >  7:34248/1‑147 (MQ=255)                                                                   gAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTccc                                                                                                                           >  6:104005/1‑106 (MQ=255)                                                                   gAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTccc                                                                                                                           <  5:104005/106‑1 (MQ=255)                                                                   gAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAGGCTGAAGCCTGTGACTTACCTGTgg                                                                               <  4:130432/148‑1 (MQ=255)                                                                     gTACAACTGGTACCTGCATACCGTGTGAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAGGCTGAAGCCTGTGACTTACCtgt                                                                                 >  1:4138/1‑145 (MQ=255)                                                                     gTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAGGCTGAAGCCTGTGACTTACCtgt                                                                                 <  2:4138/144‑1 (MQ=255)                                                                        cAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCgg                                                                         >  4:294949/1‑149 (MQ=255)                                                                        cAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCgg                                                                         <  2:336104/149‑1 (MQ=255)                                                                          aCTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGc                                                                       <  5:131422/149‑1 (MQ=255)                                                                              gTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCACATAGCGGGC‑CCGCCCCCTCCCCCAGGGGTAAT‑‑TCGAAGGGGGGCGGCAGTGGCGTACCAGTTGGGGCGGGCGTga                                                                   >  5:219849/1‑148 (MQ=255)                                                                                 ccTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGccc                                                                 <  3:294949/148‑1 (MQ=255)                                                                                     cATACCGTGT‑AAACCAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGGGTCGCCCGCTTCGCGGGC‑ACGCCCGCTCCCGCTGGGTAATT‑‑TCTAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCcgcg                                                              <  6:319299/147‑1 (MQ=255)                                                                                      atcccGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAGGCTGAAGCCTGGGACTTACCTGTGGGAGCGGGCGTGCCCGCGAag                                                           <  3:203721/146‑1 (MQ=255)                                                                                          cGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑CCGCCCCCGCCCGGCGGGGAATT‑‑TGGAAGGGTGGAGCCGGGGGCGTACCTGTGGGAGCGGGCGTGGCCGGGCAGCggg                                                       >  2:222079/1‑149 (MQ=255)                                                                                                aaaCGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACCCCCGCTGCCGGAGGGTAATT‑‑TCGAAGGCTGAAGCCTGGGAGTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGggcgggc                                                  >  1:32509/1‑147 (MQ=39)                                                                                                aaaCAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACCCCCGCACCCCCAGGGGAATT‑‑TAGAAGGCTGAAGCCTGTGAATTAACAGTGGGAGCGGGCCTGCCCGCGAAGAGGGCGGcc                                                  >  2:120840/1‑149 (MQ=25)                                                                                                  acaaaaaCGCCGCCCTTGAGGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAGGCTGAAGCCtgt                                                                                            >  1:312399/4‑105 (MQ=38)                                                                                                  acaaaaaCGCCGCCCTTGAGGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAGGCTGAAGCCtgt                                                                                            <  2:312399/102‑1 (MQ=38)                                                                                                                 cTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCt                                  >  3:99886/1‑148 (MQ=255)                                                                                                                            cgTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAGGCTGAAGc                                                                                                >  5:167697/1‑75 (MQ=255)                                                                                                                            cgTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAGGCTGAAGc                                                                                                <  6:167697/75‑1 (MQ=255)                                                                                                                                tttttttgTGACGGGTGCCGCCCTC‑TCGCGGGCAACGCCGGGCCCCGCTGTTTATTT‑‑TCTACGGCTGACCCTTGTTACTACGGTGGGGTCGGGGGGGGGCCGGCTAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCg                   <  2:32509/148‑1 (MQ=255)                                                                                                                                                 tCGCCCTTTTGGGGGGA‑AGGCCGGCTCCCGAAGGTTATTT‑‑TCGATGGTTTAAGCGTGTTATTTACTTGTGGTAGGGGGGGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTg  <  4:99886/148‑1 (MQ=255)                                                                                                                                                 tCGCCCTCTTCGCGGGC‑ACGCCCGCTGCCGCAGGGTAATTCCCCTTCGGCTGAAGCGTGTGACTTACCTGTGGGAGCGGGGGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGtt   <  1:124193/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                      ATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGT‑AAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC‑ACGCCCGCTCCCGCAGGGTAATT‑‑TCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG  >  NC_002947/5914013‑5914303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.