New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	594771 =	31 (0.480)	4 (0.070)	3/242	NT	7.2%	intergenic (‑10/+117)	PP_0505/PP_0506	hypothetical protein/ABC transporter permease
	?	NC_002947	594856 =	74 (1.240)					intergenic (‑95/+32)	PP_0505/PP_0506	hypothetical protein/ABC transporter permease

ACCGGCAATCGCTGGCTGACGGCCTGTCCATACACCTCTGAGTGCGCGTAATGATCAAACACCTCACCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/594928‑594771 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgcgaagCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAGGATGATAGCCAGCAAGGTCCATTCATG  >  NC_002947/594856‑595001                                                                                                                                                                                                                                                                                                                  ACCGGCAATCGCTGGCTGACGGCCTGTCCATACACCTCTGAGTGCGCGTAATGATCAAACACCTCACCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCAT                                                                                                                                                              <  7:359517/148‑1  CCGGCAATCGCTGGCTGACGGCCTGTCCATACACCTCTGAGTGCGCGTAATGATCAAACACCTCACCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGC                                                                                                                                                            <  5:312109/149‑1        ATCGCTGGCTGACGGCCTGTCCATACACCTCTGAGTGCGCGTAATGATCAAACACCTCACCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCtc                                                                                                                                                      <  5:322810/149‑3                                                                                          GCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTA                                                                          >  5:1746/1‑143                                                                                          GCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTA                                                                          <  6:1746/143‑1                                                                                            TCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGC                                                                   >  5:25707/1‑148                                                                                            TCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCC                                                                  >  6:349524/1‑149                                                                                                                                                     GCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACCCGGCCCCCAGGATGATAGCCAGCAAGGTC          >  7:308736/1‑148                                                                                                                                                      CCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAGGATGATAGCCAGCAAGGTCC         <  5:100764/148‑1                                                                                                                                                       CCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAGGATGATAGCCAGCAAGGTCCAT       >  4:309009/1‑149                                                                                                                                                         GCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAGGATGATAGCCAGCAAGGTCCATT      >  7:680/1‑148                                                                                                                                                            AAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGCTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAGGATGATAGCCAGCAAGGTCCATTCATG  <  5:349524/149‑1                                                                                                                                                                                                                                                                                                                  ACCGGCAATCGCTGGCTGACGGCCTGTCCATACACCTCTGAGTGCGCGTAATGATCAAACACCTCACCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/594928‑594771 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgcgaagCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAGGATGATAGCCAGCAAGGTCCATTCATG  >  NC_002947/594856‑595001

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.