| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 685159 | 76 (1.170) | 4 (0.070) | 3/248 | NT | 5.4% | coding (1088/2400 nt) | cadA‑II | cadmium translocating P‑type ATPase |
| ? | NC_002947 | = 685252 | 70 (1.150) | coding (995/2400 nt) | cadA‑II | cadmium translocating P‑type ATPase | |||||
AGCGCCAGTACCAGCACGGCCGGGACGAACACCTGGCTGACACGGTCGACCAGCTTCTGGATCGGCGCTTTGGCGGCCTGGGCGTCTTCCACCAGGCGGATGATGCGCGCCAGCACGGTCTCGGTGCCCAGCGCCTGGGTACGCACCAGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/685006‑685159‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagccATGCCGATGAGGCCCTGATCAGCGGCGAGAGCCTGCCAGTGCCCAAGCAACCCGGTGACAGCGTCACCGGTGGCGCCATCAATGGCGAAGGCCGGCTGCTGGTGCGTACCCAGGCGCTGGGCACCGAGACCGTGCTGGCGCGCATCAT < NC_002947/685252‑685105 AGCGCCAGTACCAGCACGGCCGGGACGAACACCTGGCTGACACGGTCGACCAGCTTCTGGATCGGCGCTTTGGCGGCCTGGGCGTCTTCCACCAGGCGGATGATGCGCGCCAGCACGGTCTCGGTGCCCAGCGCCTGGGTACGCACCAG > 6:357606/1‑149AGCGCCAGTACCAGCACGGCCGGGACGAACACCTGGCTGACACGGTCGACCAGCTTCTGGATCGGCGCTTTGGCGGCCTGGGCGTCTTCCACCAGGCGGATGATGCGCGCCAGCACGGTCTCGGTGCCCAGCGCCTGGGTACGCACCA < 3:32054/148‑1 GCGCCAGTACCAGCACGGCCGGGACGAACACCTGGCTGACACGGTCGACCAGCTTCTGGATCGGCGCTTTGGCGGCCTGGGCGTCTTCCACCAGGCGGATGATGCGCGCCAGCACGGTCTCGGTGCCCAGCGCCTGGGTACGCACCAGC > 4:236211/1‑149 GCGCCAGTACCAGCACGGCCGGGACGAACACCTGGCTGACACGGTCGACCAGCTTCTGGATCGGCGCTTTGGCGGCCTGGGCGTCTTCCACCAGGCGGATGATGCGCGCCAGCACGGTCTCGGTGCCCAGCGCCTGGGTACGCACCAG > 8:156176/1‑148 GCCAGTACCAGCACGGCCGGGACGAACACCTGGCTGACACGGTCGACCAGCTTCTGGATCGGCGCTTTGGCGGCCTGGGCGTCTTCCACCAGGCGGATGATGCGCGCCAGCACGGTCTCGGTGCCCAGCGCCTGGGTACGCACCAGCAG > 3:397106/1‑149 CCAGTACCAGCACGGCCGGGACGAACACCTGGCTGACACGGTCGACCAGCTTCTGGATCGGCGCTTTGGCGGCCTGGGCGTCTTCCACCAGGCGGATGATGCGCGCCAGCACGGTCTCGGTGCCCAGCGCCTGGGTACGCACCAGCAGC < 8:303677/149‑1 CGGCGCTTTGGCGGCCTGGGCGTCTTCCACCAGGCGGATGATGCGCGCCAGCACGGTCTCGGTGCCCAGCGCCTGGGTACGCACCAGCAGCC < 4:161925/92‑1 GCTTTGGAGGCCTGGGCGTCTTCCACCAGGCGGATGATGCGCGCCAGCACGGTCTCGGTGCCCAGCGCCTGGGTACGCACCAGCAGCCATGCCGATGAGGCCCTGATCAGCGGCGAGAGCCTGCCAGTGCCCAAGCAACCCGGTGACAG > 4:168717/1‑149 TGATGCGCGCCAGCACGGTCTCGGTGCCCAGCGCCTGGGTACGCACCAGCAGCCATGCCGATGAGGCCCTGATCAGCGGCGAGGGCCTGCCAGTGCCCAAGCAACCCGGTGACAGCGTCACCGGTGGCGCCATCAATGGCGAAGGCCGG > 5:189428/1‑149 GCGCCAGCACGGTCTCGGTGCCCAGCGCCTGGGTACGCACCAGCAGCCATGCCGATGAGGCCCTGATCAGCGGCGAGGGCCTGCCAGTGCCCAAGCAACCCGGTGACAGCGTCACCGGTGGCGCCATCAATGGCGAAGGCCGGCTGCTG < 6:189428/149‑1 GCGCCAGCACGGTCTCGGTGCCCAGCGCCTGGGTACGCACCAGCAGCCATGCCGATGAGGCCCTGATCAGCGGCGAGAGCCTGCCAGTGCCCAAGCAACCCGGTGACAGCGTCACCGGTGGCGCCATCAATGGCGAAGGCCGGCTGCTG < 3:168717/149‑1 CAGCAGCCATGCCGATGAGGCCCTGATCAGCGGCGAGAGCCTGCCAGTGCCCAAGCAACCCGGTGACAGCGTCACCGGTGGCGCCATCAATGGCGAAGGCCGGCTGCTGGTGCGTACCCAGGCGCTGGGCACCGAGACCGTGCTGGCGC < 8:285464/149‑1 CAGCCATGCCGATGAGGCCCTGATCAGCGGCGAGAGCCTGCCAGTGCCCAAGCAACCCGGTGACAGCGTCACCGGTGGCGCCATCAATGGCGAAGGCCGGCTGCTGGTGCGTACCCAGGCGCTGGGCACCGAGACCGTGATGGCGCGCA > 5:150520/1‑149 CCATGCCGATGAGGCCCTGATCAGCGGCGAGAGCCTGCCAGTGCCCAAGCAACCCGGTGACAGCGTCACCGGTGGCGCCATCAATGGCGAAGGCCGGCTGCTGGTGCGTACCCAGGCGCTGGGCACCGAGACCGTGCTGGCGCGCATCA > 3:385987/1‑149 CATGCCGATGAGGCCCTGATCAGCGGCGAGAGCCTGCCAGTGCCCAAGCAACCCGGTGACAGCGTCACCGGTGGCGCCATCAATGGCGAAGGCCGGCTGCTGGTGCGTACCCAGGAGCTGGGCACCGAGACCGTGCTGGCGCGCATCAT > 8:373784/1‑149 AGCGCCAGTACCAGCACGGCCGGGACGAACACCTGGCTGACACGGTCGACCAGCTTCTGGATCGGCGCTTTGGCGGCCTGGGCGTCTTCCACCAGGCGGATGATGCGCGCCAGCACGGTCTCGGTGCCCAGCGCCTGGGTACGCACCAGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/685006‑685159‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagccATGCCGATGAGGCCCTGATCAGCGGCGAGAGCCTGCCAGTGCCCAAGCAACCCGGTGACAGCGTCACCGGTGGCGCCATCAATGGCGAAGGCCGGCTGCTGGTGCGTACCCAGGCGCTGGGCACCGAGACCGTGCTGGCGCGCATCAT < NC_002947/685252‑685105 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |