New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	755172 =	67 (1.030)	3 (0.050)	3/244	NT	5.0%	intergenic (‑18/‑233)	PP_0645/PP_0646	hypothetical protein/hypothetical protein
	?	NC_002947	755232 =	51 (0.850)					intergenic (‑78/‑173)	PP_0645/PP_0646	hypothetical protein/hypothetical protein

CGATTCCTACGAGCAACGCGGATTTAGGACTAAGCACAACCTAGCGGTTTGGGAACTAGAGCCCTCCCCCTTTTTGTTCACTCCCGCAAATAAAAAAAGGGGGACAGACCCGAATGGCACTAACTTAACGTGCTTCGGGTGCCCTTTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/755322‑755172 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctttttttATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAGGTTCTT  >  NC_002947/755232‑755374                                                                                                                                                                                                                                                                                                        CGATTCCTACGAGCAACGCGGATTTAGGACTAAGCACAACCTAGCGGTTTGGGAACTAGAGCCCTCCCCCTTTTTGTTCACTCCCGCAAATAAAAAAAGGGGGACAGACCCGAATGGCACTAACTTAACGTGCTTCGGGTGCCCTTTTT                                                                                                                                                   <  8:141952/149‑1   ATTCCTACGAGCAACGCGGATTAAGGAATAAGCACTACCTAGCGGTTTGGGAACTAGAGCCCTCCCCCTTTTTCTTCACTCCCGCAAATAAAAAAAGGGGGACAGACCCGAATGGCACTAACTTAACGTGCTTCGGGTGCCCTTTTTTT                                                                                                                                                 <  3:291361/149‑1                                                                                      GCAAATAAAAAAAGGGGGACAGACCCGAATGGCACTAACTTAACGTGCTTCGGGTGCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCG                                                               >  5:5532/1‑148                                                                                        AAATAAAAAAAGGGGGACAGACCCGAATGGCACTAACTTAACGTGCTTCGGGTGCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTT                                                                    >  5:158638/1‑141                                                                                        AAATAAAAAAAGGGGGACAGACCCGAATGGCACTAACTTAACGTGCTTCGGGTGCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTT                                                                    <  6:158638/141‑1                                                                                                                                            TGCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAG        <  6:5532/149‑1                                                                                                                                              CCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAGGT      >  2:157323/1‑149                                                                                                                                              CCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTAGTAGGAATCGTCTCGTTATCTTCTCGAGGCCTCAGTTGCCCCTTCATAGCTGTTAGGT      >  6:121447/1‑149                                                                                                                                               CCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAGGTT     >  4:212752/1‑149                                                                                                                                                   TTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAGGTTCTT  <  3:212752/148‑1                                                                                                                                                                                                                                                                                                        CGATTCCTACGAGCAACGCGGATTTAGGACTAAGCACAACCTAGCGGTTTGGGAACTAGAGCCCTCCCCCTTTTTGTTCACTCCCGCAAATAAAAAAAGGGGGACAGACCCGAATGGCACTAACTTAACGTGCTTCGGGTGCCCTTTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/755322‑755172 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctttttttATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAGGTTCTT  >  NC_002947/755232‑755374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.