New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	755172 =	67 (1.030)	3 (0.050)	3/244	NT	5.0%	intergenic (‑18/‑233)	PP_0645/PP_0646	hypothetical protein/hypothetical protein
	?	NC_002947	755232 =	51 (0.850)					intergenic (‑78/‑173)	PP_0645/PP_0646	hypothetical protein/hypothetical protein

CGGTTGTGACGGTCTATGTGGTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAGGTTCTT  >  NC_002947/755090‑755374                                                                                                                                                   |                                                                                                                                               gggTTGTGTCTTTGTATGTGTTTTGCAATTTTTTATGTATTGGCAGTGCGCCGTGGTTTGGTGATAGCTC‑TGCCTCCGACACAAAAAAATGGCACCCGTTGGAATTTAAGTTAG‑‑‑TGCGATTCTGGTCTTTCGACCTTTTTTTATTTGCg                                                                                                                                          <  4:271744/148‑1 (MQ=255) cGGTTGTGACGGTCTATGTGGTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCg                                                                                                                                          <  2:141437/149‑1 (MQ=255)  cgagcaacgcggatttaggactaagcacaacctagcggtttgggaactagagccctccccctttttgttcactcccgcaaatAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGc                                                                                                                                           >  5:5532‑M1/83‑148 (MQ=255)       aacgcggatttaggactaagcacaacctagcggtttgggaactagagccctccccctttttgttcactcccgcaaatAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTAttt                                                                                                                                             <  6:158638‑M1/64‑1 (MQ=255)       aacgcggatttaggactaagcacaacctagcggtttgggaactagagccctccccctttttgttcactcccgcaaatAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTAttt                                                                                                                                             >  5:158638‑M1/78‑141 (MQ=255)         aCGGTCTATGTGGTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGaa                                                                                                                                  <  6:318250/149‑1 (MQ=255)         aCGGTCTATGTGGTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGa                                                                                                                                   <  5:232270/148‑1 (MQ=255)                aTGTGGTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAg                                                                                                                           >  7:285381/1‑149 (MQ=255)                  gtgCTTGGGCATTTCGTAGCTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTC‑TGCCTCCGAAACAAAAAAAGGGCACGCGAAGCAAGTTTAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAgg                                                                                                                          <  4:351557/148‑1 (MQ=255)                   tgGTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAgggg                                                                                                                        <  4:34763/149‑1 (MQ=255)                     gTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGa                                                                                                                      <  3:190608/149‑1 (MQ=255)                       tGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAgg                                                                                                                    >  6:363044/1‑149 (MQ=255)                        ggCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAgg                                                                                                                    <  5:351163/148‑1 (MQ=255)                         gCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGc                                                                                                                  >  5:27166/1‑149 (MQ=255)                         gCCATTTCGTAGGTCATGCCAGTGCGCCGTGCATTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCAGGTTAAGTTAG‑‑‑TGCCATTCGGGGCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAggg                                                                                                                   <  5:296336/148‑1 (MQ=255)                          ccATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCGTGCATCCGAAACAAAAAAAGGGCACCCGAACAACGTTAAGTTAT‑‑‑TGCAATACGGGTCTTTCCCCCTTTTTTTATTTGCGGTAGTCAACAAAAAggagatcga                                                                                                                   >  1:83310/1‑141 (MQ=255)                          ccATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAg                                                                                                                           <  2:83310/139‑1 (MQ=255)                          ccATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGc                                                                                                                  >  7:32176/1‑148 (MQ=255)                             tttCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTa                                                                                                              <  4:331490/149‑1 (MQ=255)                                             aGTGCGCCGTGCTTTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCACTAGTTCCCAAACCGCTAg                                                                                              <  5:345764/149‑1 (MQ=255)                                                 cgcCGTGCTTTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGtt                                                                                           <  4:288245/148‑1 (MQ=255)                                                  gcCGTGCTTTGGTCATCGCTC‑TGCCTACGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAAACGCTAGGTtgt                                                                                         >  8:209481/1‑149 (MQ=255)                                                  gcCGTGCTTTGGTCATCGCTC‑TGCCCCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTtgt                                                                                         >  1:369743/1‑149 (MQ=255)                                                   ccGTGCTTTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAggggg                                                                                                                       >  6:18916/1‑118 (MQ=255)                                                   ccGTGCTTTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAggggg                                                                                                                       <  5:18916/118‑1 (MQ=255)                                                    cGTGCTTTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGc                                                                                       >  1:102032/1‑149 (MQ=255)                                                     gTGCTTTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACATAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCt                                                                                      >  7:278205/1‑149 (MQ=255)                                                             gTCATCGCTC‑TGCCTCAGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGTGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCt                                                                               <  8:285381/148‑1 (MQ=255)                                                                aTCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAAt                                                                           >  7:287653/1‑149 (MQ=255)                                                                 tCGCTC‑TGCCTCCGACACAAAAAAAGTGCACCCGAAGCACGTTAAGTTAGTCTTATTATTCGGACATGTTCGCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTaa                                                                             <  1:131269/149‑1 (MQ=255)                                                                  cGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAg                                                                                   <  4:140352/139‑1 (MQ=255)                                                                  cGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAg                                                                                   >  3:140352/1‑139 (MQ=255)                                                                    ctc‑tGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCcgc                                                                       <  8:32176/149‑1 (MQ=255)                                                                          ccTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTg                                                                   <  7:338509/148‑1 (MQ=255)                                                                          ccTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGc                                                                  <  2:102032/149‑1 (MQ=255)                                                                               gACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTa                                                             <  5:363044/149‑1 (MQ=255)                                                                                 gcaaataaaaaaagggggacagacccgaatggcactaacttaacgtgcttcgggtgccctttttttATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCg                                                               >  5:5532‑M2/67‑148 (MQ=255)                                                                                  acaAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTa                                                             <  2:355578/146‑1 (MQ=255)                                                                                  acaAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTa                                                             >  1:355578/1‑146 (MQ=255)                                                                                   aaataaaaaaagggggacagacccgaatggcactaacttaacgtgcttcgggtgccctttttttATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGtt                                                                    >  5:158638‑M2/65‑141 (MQ=255)                                                                                   aaataaaaaaagggggacagacccgaatggcactaacttaacgtgcttcgggtgccctttttttATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGtt                                                                    <  6:158638‑M2/77‑1 (MQ=255)                                                                                    AAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAAGAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTAGTGCTTATTCCTTAATCCGCGTTGCTCGTAGGAAt                                                        <  3:291361‑M1/149‑1 (MQ=255)                                                                                      AAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCg                                                      <  8:141952‑M1/149‑1 (MQ=255)                                                                                            gccACCCGAAGCACGTTAAGTTAG‑‑‑GGCCAATCGGGTCTGTCCCCCTTTTTTAATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGt                                                <  2:86815/147‑1 (MQ=255)                                                                                                 ccGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGtt                                                                    <  1:251913/124‑1 (MQ=255)                                                                                                 ccGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGtt                                                                    >  2:251913/1‑124 (MQ=255)                                                                                                   gAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAgctgc                                         <  8:287653/149‑1 (MQ=255)                                                                                                          gTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAg                                                            <  5:240749/123‑1 (MQ=255)                                                                                                          gTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAg                                                            >  6:240749/1‑123 (MQ=255)                                                                                                               gTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGtctc                                                  <  4:50357/128‑1 (MQ=255)                                                                                                               gTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGtctc                                                  >  3:50357/1‑128 (MQ=255)                                                                                                                  aG‑‑‑TGCCATTCGGGTCTGTCCCCATTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCAttt                           <  8:278205/148‑1 (MQ=255)                                                                                                                   g‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGc                         <  6:27166/149‑1 (MQ=255)                                                                                                                       tGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTTGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGcc                        >  5:417274/1‑149 (MQ=255)                                                                                                                        gCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGcc                        <  2:175831/148‑1 (MQ=255)                                                                                                                               gggTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTcc                  >  4:304259/1‑147 (MQ=255)                                                                                                                                ggTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGt                                                              >  6:322514/1‑102 (MQ=255)                                                                                                                                ggTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGt                                                              <  5:322514/102‑1 (MQ=255)                                                                                                                                ggTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAg               <  3:304259/149‑1 (MQ=255)                                                                                                                                      tCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATGCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGtt          <  7:209481/148‑1 (MQ=255)                                                                                                                                       tgccctttttttATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAg        <  6:5532‑M2/137‑1 (MQ=255)                                                                                                                                       cccccTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAg        <  2:369743/149‑1 (MQ=255)                                                                                                                                        ccccTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGc                         <  7:110272/131‑1 (MQ=255)                                                                                                                                        ccccTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGc                         >  8:110272/1‑131 (MQ=255)                                                                                                                                        ccccTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGc              >  2:176488/1‑142 (MQ=255)                                                                                                                                        ccccTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGc              <  1:176488/142‑1 (MQ=255)                                                                                                                                        ccccTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAgg       >  2:358/1‑149 (MQ=255)                                                                                                                                         ccctttttttATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAGGt      >  2:157323‑M2/11‑149 (MQ=255)                                                                                                                                         ccctttttttATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTAGTAGGAATCGTCTCGTTATCTTCTCGAGGCCTCAGTTGCCCCTTCATAGCTGTTAGGt      >  6:121447‑M2/11‑149 (MQ=255)                                                                                                                                          cctttttttATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAGGtt     >  4:212752‑M2/10‑149 (MQ=255)                                                                                                                                              tttttATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAGGTTCtt  <  3:212752‑M2/143‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                               CGGTTGTGACGGTCTATGTGGTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTC‑TGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAG‑‑‑TGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAGGTTCTT  >  NC_002947/755090‑755374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.