New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1028604 = | 74 (1.140) | 5 (0.080) | 5/252 | NT | 6.9% | coding (136/1626 nt) | dppA‑III | dipeptide ABC transporter substrate‑binding protein |
? | NC_002947 | 1028658 = | 65 (1.050) | coding (82/1626 nt) | dppA‑III | dipeptide ABC transporter substrate‑binding protein |
AACAATGAGGCCACCATGCTCAAACACGCAGTCATTCCGTTCCTGCTGGGTGCAGGCTTGCTCAGCGGCGCACCGTCGGCCGTTGCCGCATCCAACCTGGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1028754‑1028604 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaccaGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTTGTCATTTTTTGGATGAGGTGGCCTCGTGAGCCGACCTGCGGATACTTATG > NC_002947/1028658‑1028804 AACAATGAGGCCACCATGCTCAAACACGCAGTCATTCCGTTCCTGCTGGGTGCAGGCTTGCTCAGCGGCGCACCGTCGGCCGTTGCCGCATCCAACCTGGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACAC > 6:248182/1‑149 AACAATGAGGCCACCATGCTCAAACACGCAGTCATTCCGTTCCTGCTGGGTGCAGGCTTGCTCAGCGGCGCACCGTCGGCCGTTGCCGCATCCAACCTGGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACAC > 7:284430/1‑149 CAATGAGGCCACCATGCTCAAACACGCAGTCATTCCGTTCCTGCTGGGTGCAGGCTTGCTCAGCGGCGCACCGTCGGCCGTTGCCGCATCCAACCTGGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACACCA > 4:283968/1‑149 AACCTGGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACACCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCT > 7:321892/1‑148 GGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACACCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGT > 7:358513/1‑149 GTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACACCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTT > 8:62587/1‑149 TTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACACCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTTGTC < 8:358513/149‑1 GCCGGCTTCGATCCGGGGCAGTACACCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTTGTCATTTTTTGGATGAGGTGGCCT < 7:62587/149‑1 AGTACACCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTTGTCATTTTTTGGATGAGGTGGCCTCGTGAGCCGACCTGCGGAT < 8:321892/149‑1 CACCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTTGTCATTTTTTGGATGAGGTGGCCTCGTGAGCCGACCTGCGGATACT > 8:142078/1‑148 CACCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTTGTCATTTTTTGGATGAGGTGGCCTCGTGAGCCGACCTGCG < 1:233997/142‑1 CACCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTTGTCATTTTTTGGATGAGGTGGCCTCGTGAGCCGACCTGCG > 2:233997/1‑142 CAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTTGTCATTTTTTGGATGAGGTGGCCTCGTGAGCCGACCTGCGGATACTTATG < 8:3381/149‑1 CAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTTGTCATTTTTTGGATGAGGTGGCCTCGTGAGCCGACCTGCGGATACTTAT > 3:32640/1‑148 CAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTTGTCATTTTTTGGATGAGGTGGCCTCGTGAGCC > 5:49154/1‑131 CAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTTGTCATTTTTTGGATGAGGTGGCCTCGTGAGCC < 6:49154/131‑1 AACAATGAGGCCACCATGCTCAAACACGCAGTCATTCCGTTCCTGCTGGGTGCAGGCTTGCTCAGCGGCGCACCGTCGGCCGTTGCCGCATCCAACCTGGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1028754‑1028604 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaccaGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTTGTCATTTTTTGGATGAGGTGGCCTCGTGAGCCGACCTGCGGATACTTATG > NC_002947/1028658‑1028804 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |