| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1125330 | 77 (1.180) | 4 (0.060) | 3/254 | NT | 5.2% | coding (1217/1377 nt) | tdcG‑II | L‑serine dehydratase |
| ? | NC_002947 | = 1125398 | 72 (1.150) | coding (1149/1377 nt) | tdcG‑II | L‑serine dehydratase | |||||
GATGATGTTGACGGCCAGGCCGCCACGGGCGGTCTCTTTGTATTTGCTTTTCATGTCGGCGCCGGTCTGGCGCATGGTGCGGATGACCTTGTCCAGCGACACGTAGTGCTGCCCGTCGCCGCGCAGGGCCATGCGTACCGCGTTGATGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1125179‑1125330‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctGACCTGCGACCCGATCGGCGGCCTCGTACAGGTGCCCTGTATCGAGCGCAATGCGATGGGCTCGGTGAAGGCCATCAACGCGGTACGCATGGCCCTGCGCGGCGACGGGCAGCACTACGTGTCGCTGGACAAGGTCATCCGC < NC_002947/1125398‑1125257 GATGATGTTGACGGCCAGGCCGCCACGGGCGGTCTCTTTGTATTTGCTTTTCATGTCGGCGCCGGTCTGGCGCATGGTGCGGATGACCCTGTCCAGCGACACGTAGTGCTGCCCGTCGCCGCGCAGGGCCATGCGTACCGCGTTGATGG < 2:54611/149‑1GATGATGTTGACGGCCAGGCCGCCACGGGCGGGCTCTTTGTATGTGCTTTTCATGTCGGCGCCGGTCTGGCGCATGGTGCGGATGACCTTGTCCAGCGACACGTAGTGCTGCCCGTCGCCGCGCAGGGCCATGCGTACCGCGTTGATGG > 6:173897/1‑149 ATGATGTTGACGGCCAGGCCGCCACGGGCGGTCTCTTTGTATTTGCTTTTCATGTCGGCGCCGGTCTGGCGCATGGTGCGGATGACCTTGTCCAGCGCCACGTAGTGCTGCCCGTCGCCGCGCAGGGCCCTGCGTACCGCGTTGATGGC > 8:264506/1‑149 TGATGCTGACGGCCAGGCCGCCACGGGCGGTCTCTTTGTATTTGCTTTTCATGGCGGCGCCGGTCTGGCGCATGGTGCGGATGACCTTGTCCAGCGACACGTAGTGCTGCCCGTCGCCGCGCAGGGCCATGCGTACCGCGTTGATGGCC < 8:329653/149‑1 TTTGCTTTTCATGTCGGCGCCGGTCTGGCGCATGGTGCGGATGACCTTGTCCAGCGACACGTAGTGCTGCCCGTCGCCGCGCAGGGCCATGCGTACCGCGTTGATGGCCTGACCTGCGACCCGATCGGCGGCCTCGTACAGGTGCCCTG > 5:395460/1‑149 GATGACCTTGTCCAGCGACACGTAGTGCTGCCCGTCGCCGCGCAGGGCCATGCGTACCGCGTTGATGGCCTGACCTGCGACCCGATCGGCGGCCTCGTACAGGTGCCCTGTATCGAGCGCAATGCGATGGGCTCGGTGAAGGCCATCAA < 4:14811/149‑1 GATGACCTTGTCCAGCGACACGTAGTGCTGCCCGTCGCCGCGCAGGGCCATGCGTACCGCGTTGATGGCCTGACCTGCGACCCGATCGGCGGCCTCGTACAGGTGCCCTGTATCGAGCGCAATGCGATGGGCTCGGTGAAGGCCATCAA < 6:395460/149‑1 ATGACCTTGTCCAGCGACACGTAGTGCTGCCCGTCGCCGCGCAGGGCCATGCGTACCGCGTTGATGGCCTGACCTGCGACCCGATCGGCGGCCTCGTACAGGTGCCCTGTATCGAGCGCAATGCGATGGGCTCGGTGAAGGCCATCAAC < 3:148593/149‑1 GGCCTGACCTGCGACCCGATCGGCGGCCTCGTACAGGTGCCCTGTATCGAGCGCAATGCGATGGGCTCGGTGAAGGCCATCAACGCGGTACGCATGGCCCTGCGCGGCGACGGGCAGCACTACGTGTCGCTGGACAAGGTCATCCGC < 7:78195/147‑1 GATGATGTTGACGGCCAGGCCGCCACGGGCGGTCTCTTTGTATTTGCTTTTCATGTCGGCGCCGGTCTGGCGCATGGTGCGGATGACCTTGTCCAGCGACACGTAGTGCTGCCCGTCGCCGCGCAGGGCCATGCGTACCGCGTTGATGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1125179‑1125330‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctGACCTGCGACCCGATCGGCGGCCTCGTACAGGTGCCCTGTATCGAGCGCAATGCGATGGGCTCGGTGAAGGCCATCAACGCGGTACGCATGGCCCTGCGCGGCGACGGGCAGCACTACGTGTCGCTGGACAAGGTCATCCGC < NC_002947/1125398‑1125257 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |