| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1785193 = | 57 (0.880) | 4 (0.070) | 4/248 | NT | 6.6% | noncoding (72/100 nt) | PP_mr21 | t44 ncRNA |
| ? | NC_002947 | 1785229 = | 59 (0.970) | intergenic (+8/‑18) | PP_mr21/rpsB | t44 ncRNA/30S ribosomal protein S2 | |||||
GCCGAAAATGTACTTGCCCATTTTCGGGTTCCAGTAACGGGTCTGGTGGCCGAAGTGCACACCGGCCTTCAGCATATCGCGCATGTTGACTTGGGACATGATAGTTCCTTGATAAGTCGGGTTGGGCCTCCACGTATCCCAATGACCAACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1785345‑1785193‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaacccgACTTATCAAGGAACTATCATGTCCCAAGTCAACATGCGCGATATGCTGAAGGCCGGTGTGCACTTCGGCCACCAGACCCGTTACTGGAACCCGAAAATGGGCAAGTACATTTTCGGCGCGCGTAACAAGATCCACATCGTC > NC_002947/1785229‑1785369 GCCGAAAATGTACTTGCCCATTTTCGGGTTCCAGTAACGGGTCTGGTGGCCGAAGTGCACACCGGCCTTCAGCATATCGCGCATGTTGACTTGGGACATGATAGTTCCTTGATAAGTCGGGTTGGGCCTCCACGTATCCCAATGACCAA < 4:237599/149‑1GCCGAAAATGTACTTGCCCATTTTCGGGTTCCAGTAACGGGTCTGGTGGCCGAAGTGCACACCGGCCTTCAGCATATCGCGCATGTTGACTTGGGACATGATAGTTCCTTGATAAGTCGGGGTGGGCCTCCACGTATCCCAATGACCAA < 3:363469/149‑1 TTGATAAGTCGGGTTGGGCCTCCACGTATCCCAATGACCAACCCGACTTATCAAGGAACTATCATGTCCCAAGTCAACATGCGCGATATGCTGAAGGCCGGTGTGCACTTCGGCCACCAGACCCGTTACTGGAACCCGAAAATGGGC > 2:106712/1‑147 GTCGGGTTGGGTCTCCACGTATCCCAATGACCAACCCGACTTATCAAGGAACTATCATGTCCCAAGTCAACATGCGCGATATGCTGAAGGCCGGTGTGCACTTCGGCCACCAGACCCGTTACTGGAACCCGAAAATGGGCAAGTACATT > 2:277070/1‑149 GGGTTGGGCCTCCACGTATCCCAATGACCAACCCGACTTATCAAGGAACTATCATGTCCCAAGTCAACATGCGCGATATGCTGAAGGCCGGTGTGCACTTCGGCCACCAGACCCGTTACT > 8:240988/1‑120 GGTTGGGCCTCCACGTATCCCAATGACCAACCCGACTTATCAAGGAACTATCATGTCCCAAGTCAACATGCGCGATATGCTGAAGGCCGGTGTGCACTTCGGCCACCAGACCCGTTACTGGAACCCGAAAATGGGCAAGTACATTTTCG > 5:55849/1‑149 CCAACCCGACTTATCAAGGAACTATCATGTCCCAAGTCAACATGCGCGATATGCTGAAGGCCGGTGTGCACTTCGGCCACCAGACCCGTTACTGGAACCCGAAAATGGGCAAGTACATTTTCGGCGCGCGTAACAAGATCCACATCGTC < 4:363469/149‑1 CCAACCCGACTTATCAAGGAACTATCATGTCCCAAGTCAACATGCGCGATATGCTGAAGACCGGTGTGCACTTCGGCCACCAGACCCGTTACTGGAACCCGAAAATGGGC > 7:30368/1‑110 CCAACCCGACTTATCAAGGAACTATCATGTCCCAAGTCAACATGCGCGATATGCTGAAGACCGGTGTGCACTTCGGCCACCAGACCCGTTACTGGAACCCGAAAATGGGC < 8:30368/110‑1 GCCGAAAATGTACTTGCCCATTTTCGGGTTCCAGTAACGGGTCTGGTGGCCGAAGTGCACACCGGCCTTCAGCATATCGCGCATGTTGACTTGGGACATGATAGTTCCTTGATAAGTCGGGTTGGGCCTCCACGTATCCCAATGACCAACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1785345‑1785193‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaacccgACTTATCAAGGAACTATCATGTCCCAAGTCAACATGCGCGATATGCTGAAGGCCGGTGTGCACTTCGGCCACCAGACCCGTTACTGGAACCCGAAAATGGGCAAGTACATTTTCGGCGCGCGTAACAAGATCCACATCGTC > NC_002947/1785229‑1785369 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |