| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2134148 = | 68 (1.040) | 4 (0.060) | 4/250 | NT | 5.8% | coding (87/411 nt) | PP_1892 | hypothetical protein |
| ? | NC_002947 | 2134211 = | 66 (1.070) | coding (24/411 nt) | PP_1892 | hypothetical protein | |||||
CCTTCGCGAGAAACGGGGGGCGGCGTATACTCCGCCCCCCGTTTCAGCCATACCGAGGACCCATTCCATGGCCAACCCCTACCTGGAATATCACCTGCAACTGCTCCAGCACCTGCGCACCATTCTGGTGGCGCTGGGTGAAGCAGAGCAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2134301‑2134148‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggtgATATTCCAGGTAGGGGTTGGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCTTGTCGAAGGCATCGA > NC_002947/2134211‑2134355 CCTTCGCGAGAAACGGGGGGCGTCGTATAATCCGCCCCCCGTTTCAGCCATACCGAGGACCCATTCCATGGCCAACCCCTACCTGGAATATCACCTGCAACTGCTCCAGCACCTGCGCACCATTCTGGTGGAGCTGTGTGAAGCAGAGC < 6:82011/149‑1 GCGGCGTATACTCCGCCCCCCGTTTCAGCCATACCGAGGACCCATTCCATGGCCAACCCCTACCTGGAATATCACCTGCAACTGCTCCAGCACCTGCGCACCATTCTGGTGGCGCTGGGTGAAGCAGAGCAGGT > 3:274925/1‑134 GCGGCGTATACTCCGCCCCCCGTTTCAGCCATACCGAGGACCCATTCCATGGCCAACCCCTACCTGGAATATCACCTGCAACTGCTCCAGCACCTGCGCACCATTCTGGTGGCGCTGGGTGAAGCAGAGCAGGT < 4:274925/134‑1 TGGAATATCACCTGCAACTGCTCCAGCACCTGCGCACCATTCTGGTGGCGCTGGGTGAAGCAGAGCAGGTGATATTCCAGGTAGGGGTTGGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCG > 6:106501/1‑149 GAATATCACCTGCAACTGCTCCAGCACCTGCGCACCATTCTGGTGGCGCTGGGTGAAGCAGAGCAGGTGATATTCCAGGTAGGGGTTGGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGT < 5:106501/148‑1 CCTGCAACTGCTCCAGCACCTGCGCACCATTCTGGTGGCGCTGGGTGAAGCAGAGCATGTGATATTCCAGCTAGGGCTTGGCCATGGAATGCGTCCTCGGTATGCCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGag > 5:286130/1‑146 TGCAACTGCTCCAGCACCTGCGCACCATTCTGGTGGCGCTGGGTGAAGCAGAGCAGGTGATATTCCAGGTAGGGGTTGGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAG > 6:270110/1‑149 AGAGCAGGTGATATTCGAGGTTTGGGTGGGCCATGGAATGGGTCCTCGGTATGGCTGATACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCTTGTCGAAG < 6:286130/148‑1 CAGGTGATATTCCAGGTTGTGGTTGGCCATGTAATGGGTCTTGGGTATGGCTGAAAGGGGGGGCTGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGTCGAGCAACTGCGCCTTGTCGAATGCAT < 4:399666/148‑1 GGTGATATTCCAGGTAGGGGTTGGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCTTGTCGAAGGCATCGA > 5:298729/1‑149 GGTGATATTCCAGGTAGGGGTTGGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCTTGTCGAAGGCATCGA > 6:82993/1‑149 CCTTCGCGAGAAACGGGGGGCGGCGTATACTCCGCCCCCCGTTTCAGCCATACCGAGGACCCATTCCATGGCCAACCCCTACCTGGAATATCACCTGCAACTGCTCCAGCACCTGCGCACCATTCTGGTGGCGCTGGGTGAAGCAGAGCAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2134301‑2134148‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggtgATATTCCAGGTAGGGGTTGGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCTTGTCGAAGGCATCGA > NC_002947/2134211‑2134355 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |