New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2134148 =68 (1.040)4 (0.060) 4/250 NT 5.8% coding (87/411 nt) PP_1892 hypothetical protein
?NC_002947 2134211 = 66 (1.070)coding (24/411 nt) PP_1892 hypothetical protein

GTACTGGCTCTCAAGCGGATCCTGCGGCAATAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCTTGTCGAAGGCATCGA  >  NC_002947/2134064‑2134355
                                                                                                                                                    |                                                                                                                                                   
gTACTGGCTCTCAAGCGGATCCTGCGGCAATAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGa                                                                                                                                                     >  5:72623/1‑148 (MQ=255)
    tGGCTCTCAAGCGGATCCTGCGGCAATAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTc                                                                                                                                                >  7:94950/1‑149 (MQ=255)
     acggggggcggcgtatactccgccccccgtttcagccataccgaggacccattccatggccaacccctacctggaatatCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTc                                                                                                                                                <  5:106501‑M1/69‑1 (MQ=255)
      gCTCTCAAGCGGATCCTGCGGCAATAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCa                                                                                                                                              <  8:122231/149‑1 (MQ=255)
      gCTCTCAAGCGGATCCTGCGGCAATAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCa                                                                                                                                              <  8:71213/149‑1 (MQ=255)
      gCTCTCAAGCGGATCCTGCGGCAATAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCa                                                                                                                                              <  8:94950/149‑1 (MQ=255)
      cggggggcggcgtatactccgccccccgtttcagccataccgaggacccattccatggccaacccctacctggaatatCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCa                                                                                                                                              >  6:106501‑M1/79‑149 (MQ=255)
       ctctCAAGCGGATCCTGCGGCAATAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAg                                                                                                                                             <  7:153360/149‑1 (MQ=255)
        tctcAAGCGGATCCTGCGGCAATAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAgg                                                                                                                                            >  2:320430/1‑149 (MQ=255)
          tcAAGCGGATCCTGCGGCAATAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAgg                                                                                                                                            <  1:12152/147‑1 (MQ=255)
            aaGCGGATCCTGCGGCAATAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAg                                                                                                                                        <  8:269210/148‑1 (MQ=255)
              gCGGATCCTGCGGCAATAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAgggg                                                                                                                                     <  6:316414/149‑1 (MQ=255)
                 gATCCTGCGGCAATAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑g                                                                                                                                <  6:72623/149‑1 (MQ=255)
                       gCGGCAATAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATg                                                                                                                          >  1:228454/1‑149 (MQ=255)
                        cGGCAATAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATg                                                                                                                          <  8:173612/148‑1 (MQ=255)
                          gCAATAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACGAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAggg                                                                                                                                      >  6:47304/1‑136 (MQ=255)
                          gCAATAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAggg                                                                                                                                      <  5:47304/136‑1 (MQ=255)
                          gCAATAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGaa                                                                                                                       <  5:318222/149‑1 (MQ=255)
                          gCAATAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGaa                                                                                                                       <  7:220488/149‑1 (MQ=255)
                           cAATAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAAt                                                                                                                      <  8:71332/149‑1 (MQ=255)
                            aaTAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATg                                                                                                                     >  6:260722/1‑149 (MQ=255)
                                gCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGt                                                                                                                  <  3:23739/148‑1 (MQ=255)
                                 cGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTc                                                                                                                 <  1:320430/149‑1 (MQ=255)
                                   tCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTc                                                                                                              <  3:353513/149‑1 (MQ=255)
                                        agTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTAt                                                                                                         <  6:212144/149‑1 (MQ=255)
                                          ttCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAgg                                                                                                                                       >  7:211857/1‑119 (MQ=255)
                                          ttCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAgg                                                                                                                                       <  8:211857/119‑1 (MQ=255)
                                          ttCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATgg                                                                                                       >  8:12154/1‑149 (MQ=255)
                                           tcgtcgAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATgg                                                                                                       <  7:382012/148‑1 (MQ=255)
                                                gAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGaaa                                                                                                 >  2:387588/1‑149 (MQ=255)
                                                    cGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACggg                                                                                             <  4:302931/149‑1 (MQ=255)
                                                          aGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATgg                                                                                                       >  7:349509/1‑133 (MQ=255)
                                                          aGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATgg                                                                                                       <  8:349509/133‑1 (MQ=255)
                                                            gAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAg                                                                                     >  2:405025/1‑149 (MQ=255)
                                                                  ggCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCg                                                                                                             >  6:152846/1‑119 (MQ=255)
                                                                  ggCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCg                                                                                                             <  5:152846/119‑1 (MQ=255)
                                                                     gTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAgg                                                                                                                                            >  8:193711/1‑88 (MQ=255)
                                                                     gTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAgg                                                                                                                                            <  7:193711/88‑1 (MQ=255)
                                                                     gTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCg                                                                                        >  5:345811/1‑137 (MQ=255)
                                                                     gTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCg                                                                                        <  6:345811/137‑1 (MQ=255)
                                                                     gTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATAcgccg                                                                            >  8:321540/1‑149 (MQ=255)
                                                                        gCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGccc                                                                         <  1:387588/149‑1 (MQ=255)
                                                                          tttCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACggggg                                                                                           >  3:14428/1‑129 (MQ=255)
                                                                          tttCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACggggg                                                                                           <  4:14428/129‑1 (MQ=255)
                                                                             tggaatatcacctgcaactgctccagcacctgcgcaccattctggtggcgctgggtgaagcagagcaggtgATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCg                                                                     >  6:106501‑M2/72‑149 (MQ=255)
                                                                             cttctGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCg                                                                     <  1:405025/148‑1 (MQ=255)
                                                                              ttctGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGtt                                                                   >  3:218863/1‑149 (MQ=255)
                                                                               gaatatcacctgcaactgctccagcacctgcgcaccattctggtggcgctgggtgaagcagagcaggtgATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGt                                                                    <  5:106501‑M2/79‑1 (MQ=255)
                                                                                ctGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGttt                                                                  <  5:260722/148‑1 (MQ=255)
                                                                                   gCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAATCGGGGGGCGGAGTATACGCCGCCCCCCGTTtctc                                                               <  5:109485/148‑1 (MQ=255)
                                                                                   gCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTtctc                                                               <  5:364395/148‑1 (MQ=255)
                                                                                     ACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATAcgccgc                                                                           >  3:274925‑M1/1‑134 (MQ=255)
                                                                                     ACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATAcgccgc                                                                           <  4:274925‑M1/134‑1 (MQ=255)
                                                                                       cctgcaactgctccagcacctgcgcaccattctggtggcgctgggtgaagcagagcatgtgATATTCCAGCTAGGGCTT‑‑GGCCATGGAATGCGTCCTCGGTATGCCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTctcgag                                                            >  5:286130‑M2/62‑146 (MQ=255)
                                                                                         tgcaactgctccagcacctgcgcaccattctggtggcgctgggtgaagcagagcaggtgATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAg                                                         >  6:270110‑M2/60‑149 (MQ=255)
                                                                                         GCTCTGCTTCACACAGCTCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGATTATACGACGCCCCCCGTTTCTCGCGAAgg                                                        <  6:82011‑M1/149‑1 (MQ=255)
                                                                                           tctgctTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGt                                                      >  2:96115/1‑149 (MQ=255)
                                                                                             tgctTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGt                                                      >  3:123478/1‑147 (MQ=255)
                                                                                               ctTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAgc                                                  >  7:361083/1‑149 (MQ=255)
                                                                                               ctTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGGT‑‑GGCCATGGAATGGGTCCGCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTGCTCGCGAAGGGTCAgc                                                  >  7:355779/1‑149 (MQ=255)
                                                                                                  cACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGcc                                                                                                                             >  5:223499/1‑71 (MQ=255)
                                                                                                  cACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGcc                                                                                                                             <  6:223499/71‑1 (MQ=255)
                                                                                                  cACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAgcg                                                 <  7:92882/147‑1 (MQ=255)
                                                                                                    cccAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTTAGGGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCa                                               >  1:324860/1‑149 (MQ=255)
                                                                                                     ccAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCt                                            >  2:180749/1‑149 (MQ=255)
                                                                                                              ccaGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTa                                   <  7:12154/149‑1 (MQ=255)
                                                                                                              ccaGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTa                                   >  5:414950/1‑149 (MQ=255)
                                                                                                                   aTGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGc                               <  6:414950/148‑1 (MQ=255)
                                                                                                                    tGGGGCGCAGGTGCGGGACCAGTTGCAGGTGATATTCCAGGGAGGGGGT‑‑GGCCATGGAATGGGTCCTCGGTATGGCGGAACCGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGa                             <  6:306678/149‑1 (MQ=255)
                                                                                                                      gTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAg                            <  2:228454/148‑1 (MQ=255)
                                                                                                                       tGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGc                           >  3:163712/1‑148 (MQ=255)
                                                                                                                             aGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTgc                     <  7:321540/149‑1 (MQ=255)
                                                                                                                               gTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTgcgc                   <  2:324860/149‑1 (MQ=255)
                                                                                                                                 gCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCt                 >  7:289437/1‑149 (MQ=255)
                                                                                                                                   tGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCTTg               >  8:61048/1‑149 (MQ=255)
                                                                                                                                     gAGCAGTTGCAGGTGATATTCCAGGTAGGGGGTT‑‑GGCCAGGGAATGGGTCATCGGTATGGATGAAACGGGGGGCGGAGTATACGCCCCCCCCCGTTTATCGCGAAGGTTCAGCCCACCTTGCCCGTAACGGCGAGAAACTGAGCATTGt              >  1:248909/1‑149 (MQ=255)
                                                                                                                                        cAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCTTGTCGaa          <  1:180749/149‑1 (MQ=255)
                                                                                                                                         aGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTTAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCTTGTCGaa          <  5:82011/148‑1 (MQ=255)
                                                                                                                                          gTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGTGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCTTGTCGAAg         >  3:399666/1‑148 (MQ=255)
                                                                                                                                          agagcaggtgATATTCGAGGTTTGGGTG‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGATACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCTTGTCGAAg         <  6:286130‑M2/138‑1 (MQ=255)
                                                                                                                                              caggtgATATTCCAGGTTGTGGTT‑‑GGCCATGTAATGGGTCTTGGGTATGGCTGAAAGGGGGGGCTGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGTCGAGCAACTGCGCCTTGTCGAATGCAt     <  4:399666‑M2/142‑1 (MQ=255)
                                                                                                                                                ggtgATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCTTGTCGAAGGCATCGa  >  6:82993‑M2/5‑149 (MQ=255)
                                                                                                                                                ggtgATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCTTGTCGAAGGCATCGa  >  5:298729‑M2/5‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GTACTGGCTCTCAAGCGGATCCTGCGGCAATAGCGTCAGCAGTTCGTCGAAGCGTTCGAGGAACAGGGCGTGGCTTTCTTCTGGCACCTGCTCTGCTTCACCCAGCGCCACCAGAATGGTGCGCAGGTGCTGGAGCAGTTGCAGGTGATATTCCAGGTAGGGGTT‑‑GGCCATGGAATGGGTCCTCGGTATGGCTGAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCTTGTCGAAGGCATCGA  >  NC_002947/2134064‑2134355

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.