New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2354027 = | 47 (0.720) | 4 (0.060) | 4/250 | NT | 8.2% | coding (505/1278 nt) | PP_2068 | multidrug MFS transporter membrane fusion protein |
? | NC_002947 | 2354077 = | 45 (0.730) | coding (455/1278 nt) | PP_2068 | multidrug MFS transporter membrane fusion protein |
GGGCTGGCGTGACCGAGGCACAGGCGGCACTGGCCGCCGCCCAGGCCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2354077‑2354027 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagccCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGGGCCACCCAGTCGGCGCGGA > NC_002947/2354077‑2354221 GGGCTGGCGTGACCGAGGCACAGGCGGCACTGGCCGCCGCCCAGGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTG > 7:253499/1‑125 GGGCTGGCGTGACCGAGGCACAGGCGGCACTGGCCGCCGCCCAGGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTG < 8:253499/125‑1 GGCTGGCGTGACCGAGGCACAGGCGGCACTGGCCGCCGCCCAGGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTG < 5:30285/146‑1 GGCTGGCGTGACCGAGGCACAGGCGGCACTGGCCGCCGCCCAGGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTG > 6:30285/1‑146 GCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGGGCCACCCAGTCGGCGC > 2:373862/1‑149 GCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGGGCCACCCAGTCGGCGC > 8:137097/1‑149 GCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCA > 7:264578/1‑88 GCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCA < 8:264578/88‑1 CAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGGGCCACCCAGTCGGCGCGG < 1:373862/149‑1 AGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGGGCCACCCAGTCGGCGCGGA > 3:363951/1‑149 GGGCTGGCGTGACCGAGGCACAGGCGGCACTGGCCGCCGCCCAGGCCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2354077‑2354027 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagccCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGGGCCACCCAGTCGGCGCGGA > NC_002947/2354077‑2354221 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |