New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2354027 =	47 (0.720)	4 (0.060)	4/250	NT	8.2%	coding (505/1278 nt)	PP_2068	multidrug MFS transporter membrane fusion protein
	?	NC_002947	2354077 =	45 (0.730)					coding (455/1278 nt)	PP_2068	multidrug MFS transporter membrane fusion protein

TTCACTGCGGCGCTGTTCGGCGGTGGCGCTGCGCACGACGGCCTCGGCCTGCAGGATGGCTTGCTGTTGCTGGTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGGGCCACCCAGTCGGCGCGGA  >  NC_002947/2353929‑2354221                                                                                                                                                     |                                                                                                                                                 ttCACTGCGGCGCTGTTCGGCGGTGGCGCTGCGCACGACGGCCTCGGCCTGCAGGATGGCTTGCTGTTGCTGGTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGccc                                                                                                                                                  >  1:164514/1‑149 (MQ=255)        cggcgCTGTTCGGCGGTGGCGCTGCGCACGACGGCCTCGGCCTGCAGGATGGCTTGCTGTTGCTGGTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCt                                                                                                                                            <  7:291939/148‑1 (MQ=255)             cTGTTCGGCGGTGGCGCTGCGCACGACGGCCTCGGCCTGCAGGATGGCTTGCTGTTGCTGGTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGCCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGa                                                                                                                                      <  1:289774/149‑1 (MQ=255)               gTTCGGCGGTGGCGCTGCGCACGACGGCCTCGGCCTGCAGGATGGCTTGCTGTTGCTGGTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAgg                                                                                                                                    >  5:144483/1‑149 (MQ=255)                     cggTGGCGCTGCTCACGACGGCCTCGGCCTGCAGGATGGCTTGCTGTTGCTGGTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAggcgggcg                                                                                                                              <  5:129620/149‑1 (MQ=255)                       gTGGCGCTGCGCACGACGGCCTCGGCCTGCAGGATGGCTTGCTGTTGCTGGTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGcgcg                                                                                                                            <  6:141327/149‑1 (MQ=255)                         cagccggtgaaagccggcgatgtgctggtgcgcctgcaaaaccgcgactaccgcgcccgcctcgaccaggcccgGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGccc                                                                                                                                                  <  8:253499‑M1/51‑1 (MQ=255)                         cagccggtgaaagccggcgatgtgctggtgcgcctgcaaaaccgcgactaccgcgcccgcctcgaccaggcccgGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGccc                                                                                                                                                  >  7:253499‑M1/75‑125 (MQ=255)                                cgcACGACGGCCTCGGCCTGCAGGATGGCTTGCTGTTGCTGGTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTcgc                                                                                                                    <  3:218025/148‑1 (MQ=255)                                        ggcctcggcctGCAGGATGGCTTGCTGTTGCTGGTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCa                                                                                                           <  7:75159/149‑1 (MQ=255)                                              ggcctGCAGGATGGCTTGCTGTTGCTGGTCGTTGCGCTCGGTCGCTAGGTGTTGGCTGGCGTGGGCGGCGGGCTGTGCGGGGTGTGCGTGGGTCACGCGATCGCGGGGCTGGTCGTGGCGGGCGGGGTTGTCGCGGTTTTGCTGgcgga                                                                                                     <  4:215894/149‑3 (MQ=255)                                                 ctGCAGGATGGCTTGCTGTTGCTGGTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCAc                                                                                                    >  2:222777/1‑147 (MQ=255)                                                    cAGGATGGCTTGCTGTTGCTGGTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGca                                                                                               >  3:33490/1‑149 (MQ=255)                                                           gCTTGCTGTTGCTGGTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCa                                                                                                           >  8:78762/1‑130 (MQ=255)                                                           gCTTGCTGTTGCTGGTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCa                                                                                                           <  7:78762/130‑1 (MQ=255)                                                                 tgttgctgGTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCttt                                                                                  >  7:368715/1‑149 (MQ=255)                                                                     gctgGTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCAcc                                                                              >  6:389625/1‑149 (MQ=255)                                                                     gctgGTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCAc                                                                               <  1:222777/148‑1 (MQ=255)                                                                      ctgGTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCAcc                                                                              <  4:33490/148‑1 (MQ=255)                                                                         gTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCCGCCCGGGCCTGGTCGAGGCGGGCGGGGTAGTCGCGGTTTTGCAGGCGCCCCAGCACATCGCCGGCTTTCACCGGCt                                                                          >  7:304033/1‑149 (MQ=255)                                                                         gTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGc                                                                           <  6:144483/148‑1 (MQ=255)                                                                         gTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCt                                                                          >  3:43691/1‑149 (MQ=255)                                                                          tCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTg                                                                         <  5:389625/149‑1 (MQ=255)                                                                                 gcTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAg                                                                                                 <  8:236765/118‑1 (MQ=255)                                                                                 gcTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGgtcgt                                                                    >  3:315524/1‑147 (MQ=255)                                                                                      gTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGTCAc                                                             <  4:315524/149‑1 (MQ=255)                                                                                       tCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCAcc                                                            <  8:368715/149‑1 (MQ=255)                                                                                       tCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCAcc                                                            >  7:166448/1‑149 (MQ=255)                                                                                           tACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGcgcg                                                                                                                            >  2:24466/1‑81 (MQ=255)                                                                                           tACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGa                                                        >  6:343095/1‑149 (MQ=255)                                                                                                 ttGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCCCCGGCTGGTCGTCAGCCACCTCGACCTTgg                                                  >  6:225819/1‑149 (MQ=255)                                                                                                 ttGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTgg                                                  <  2:164514/149‑1 (MQ=255)                                                                                                 ttGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTg                                                   <  5:343095/148‑1 (MQ=255)                                                                                                  gggctggcgtgaccgaggcacaggcggcactggccgccgcccaggccagccCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTg                                                                         <  8:253499‑M2/74‑1 (MQ=255)                                                                                                  gggctggcgtgaccgaggcacaggcggcactggccgccgcccaggccagccCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTg                                                                         >  7:253499‑M2/52‑125 (MQ=255)                                                                                                   ggctggcgtgaccgaggcacaggcggcactggccgccgcccaggccagccCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTg                                                   <  5:30285‑M2/96‑1 (MQ=255)                                                                                                   ggctggcgtgaccgaggcacaggcggcactggccgccgcccaggccagccCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTg                                                   >  6:30285‑M2/51‑146 (MQ=255)                                                                                                          cTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGc                                         >  2:65850/1‑149 (MQ=255)                                                                                                                 gcggcCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGAGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCTTCAGCCACCTCGACCTTGGCTACGTAGCCAGCCAc                                  >  8:297907/1‑149 (MQ=255)                                                                                                                  cggcCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGc                                         <  5:341123/141‑1 (MQ=255)                                                                                                                  cggcCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGc                                         >  6:341123/1‑141 (MQ=255)                                                                                                                      cAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTg                                                   <  4:69081/127‑1 (MQ=255)                                                                                                                      cAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTg                                                   >  3:69081/1‑127 (MQ=255)                                                                                                                      cAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTg                             <  8:166448/149‑1 (MQ=255)                                                                                                                            cgccTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCt                         >  7:132202/1‑147 (MQ=255)                                                                                                                              ccTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAgg                     <  6:239747/149‑1 (MQ=255)                                                                                                                              ccTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCGTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAgg                     >  6:337043/1‑149 (MQ=255)                                                                                                                                  tgCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACg                                             >  4:163655/1‑121 (MQ=255)                                                                                                                                  tgCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACg                                             <  3:163655/121‑1 (MQ=255)                                                                                                                                    ccTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGGGCCAcc               <  8:132202/149‑1 (MQ=255)                                                                                                                                     cTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTTACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGGGCCAcc               >  1:337435/1‑148 (MQ=255)                                                                                                                                     cTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGGGCCAcc               >  3:214699/1‑148 (MQ=255)                                                                                                                                              gccagccCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCa                                                                  >  7:264578‑M2/8‑88 (MQ=255)                                                                                                                                              gccagccCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCa                                                                  <  8:264578‑M2/81‑1 (MQ=255)                                                                                                                                              gccagccCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGGGCCACCCAGTCGgcgc     >  2:373862‑M2/8‑149 (MQ=255)                                                                                                                                              gccagccCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGGGCCACCCAGTCGgcgc     >  8:137097‑M2/8‑149 (MQ=255)                                                                                                                                                cagccCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGGGCCACCCAGTCGGCGCgg   <  1:373862‑M2/144‑1 (MQ=255)                                                                                                                                                 agccCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGGGCCACCCAGTCGGCGCGGa  >  3:363951‑M2/5‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                 TTCACTGCGGCGCTGTTCGGCGGTGGCGCTGCGCACGACGGCCTCGGCCTGCAGGATGGCTTGCTGTTGCTGGTCGATGCGCTCGGTCGCTACCTGTTGGCTGGCCTGGGCGGCGGCCAGTGCCGCCTGTGCCTCGGTCACGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGGGCCACCCAGTCGGCGCGGA  >  NC_002947/2353929‑2354221

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.