New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2449404	57 (0.880)	3 (0.050)	3/248	NT	5.6%	coding (1679/3318 nt)	PP_2146	SNF2/RAD54 family helicase
	?	NC_002947	= 2449438	48 (0.790)					coding (1645/3318 nt)	PP_2146	SNF2/RAD54 family helicase

GCGTACGTGCTCGCCACCTTCCCAGTGCAGTGGCAGGCCTTCTATTTCGTTCAGGCGCGCGGCGTCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2449250‑2449404 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccgtCTCGATGCCCCGGCTTTGCGCGTCGCCCTGCCCTACGGCCGCATCAAGGCAGTCATGGGCACCCTGGGCGAGCTCTACTTGCACGAAGACACTGCAGGCCCGTCCCTGCGCATGGAGCGTGCCGACGCCGCGCGCCTGAACGAAA  <  NC_002947/2449438‑2449294                                                                                                                                                                                                                                                                                                              GCGTACGTGCTCGCCACCTTCCCAGTGCAGTGGCAGGCCTTCTATTTCGTTCAGGCGCGCGGCGTCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGC                                                                                                                                                         >  5:223778/1‑149       GTGCTCGCCACCTTCCCAGTGCAGTGGCAGGCCTTCTATTTCGTTCAGGCGCGCGGCGTCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGT                                                                                                                                                   <  2:399396/149‑1                                                CGTTCAGGCGCGCGGCGTCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTCTCGATGCCCCGGCTTTGCGCGTCGCCCTGCCCTACGGCC                                                                                                           <  4:74588/148‑1                                                 GTTCAGGCGCGCGGCGTCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTCTCGATGCCCCGGCTTTGCGCGTCGCCCTGCCCTACGGCCGC                                                                                                         <  6:351916/149‑1                                                       GCGCGCGGCGTCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTCTCGATGCCCCGGCTTTGCGCGTCGCCCTGCCCTACGGCCGCATCAAG                                                                                                   <  7:261515/149‑1                                                                                                                                                    GCGGCCGTCTCGATGCCCCGGCTTTGCGCGTCGCCCTGCCCTACGGCCGCATCAAGGCAGTCATGGGCACCCTGGGCGAGCTCTACTTGCACGAAGACACTGCAGGCCCGTCCCTGCGCATGGAGCGTGCCGACGCCGCGCGCCTGAAC      >  8:10112/1‑149                                                                                                                                                    GCGGCCGTCTCGATGCCCCGGCTTTGCGCGGCGCCCTGCCCTACGGCCGCATCAAGGCAGTCATGGGCACCCTGGGCGAGCTCTACTTGCACGAAGACACTGCAGGCCCGTCCCTGCGCATGGAGCGTGCCGACGCCGCGCGCCTGAAC      <  5:297435/149‑1                                                                                                                                                      GGCCGTCTCGATGCCCCGGCTTTGCGCGTCGCCCTGCCCTACGGCCGCATCAAGGCAGTCATGGGCACCCTGGGCGAGCTCTACTTGCACGAAGACACTGCAGGCCCGTCCCTGCGCATGGAGCGTGCCGACGCCGCGCGCCTGAACGA    <  4:328668/149‑1                                                                                                                                                        CCGTCTCGATGCCCCGGCTTTGCGCGTCGCCCTGCCCTACGGCCGCATCAAGGCAGTCATGGGCACCCTGGGCGAGCTCTACTTGCACGAAGACACTGCAGGCCCGTCCCTGCGCATGGAGCGTGCCGACGCCGCGCGCCTGAACGAAA  <  7:186753/149‑1                                                                                                                                                                                                                                                                                                              GCGTACGTGCTCGCCACCTTCCCAGTGCAGTGGCAGGCCTTCTATTTCGTTCAGGCGCGCGGCGTCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2449250‑2449404 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccgtCTCGATGCCCCGGCTTTGCGCGTCGCCCTGCCCTACGGCCGCATCAAGGCAGTCATGGGCACCCTGGGCGAGCTCTACTTGCACGAAGACACTGCAGGCCCGTCCCTGCGCATGGAGCGTGCCGACGCCGCGCGCCTGAACGAAA  <  NC_002947/2449438‑2449294

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.