New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2449404 | 57 (0.880) | 3 (0.050) | 3/248 | NT | 5.6% | coding (1679/3318 nt) | PP_2146 | SNF2/RAD54 family helicase |
? | NC_002947 | = 2449438 | 48 (0.790) | coding (1645/3318 nt) | PP_2146 | SNF2/RAD54 family helicase |
TTTCGTTCAGGCGCGCGGCGTCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCGCAGCAGGTGCAACACGATCGGCAGCAGGCTGTGGCGCTGGCCATCG > NC_002947/2449294‑2449571 | tttCGTTCAGGCGCGCGGCGTCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGacgg < 7:186753‑M2/149‑5 (MQ=255) tCGTTCAGGCGCGCGGCGTCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGacggcc < 4:328668‑M2/149‑7 (MQ=255) gTTCAGGCGCGCGGCGTCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGCCGCGCAAAGCCGGGGCATCGAGacggccgc < 5:297435‑M2/149‑9 (MQ=255) gTTCAGGCGCGCGGCGTCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGacggccgc > 8:10112‑M2/1‑141 (MQ=255) ccggCGCGCGGCGTCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCgg < 4:129370/146‑1 (MQ=255) ggCGCGCGGCGTCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTg > 7:273914/1‑149 (MQ=255) gcgcgcGGCGTCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGtt > 7:169474/1‑147 (MQ=255) cgcgcgGCGTCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAg < 8:186753/149‑1 (MQ=255) gcgcgGCGTCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAgg > 8:96384/1‑149 (MQ=255) cggcgTCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCg < 6:35396/149‑1 (MQ=255) ggcgTCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGa < 8:190090/149‑1 (MQ=255) tCGGCACGCTCCATGCGCAGTGACTGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCaa < 6:285238/149‑1 (MQ=255) tCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCaa < 6:335363/149‑1 (MQ=255) gCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAg > 4:33838/1‑149 (MQ=255) aCGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAggg < 5:108224/149‑1 (MQ=255) aTGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATc < 6:40318/149‑1 (MQ=255) gCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGCCGGCCGCGGTTGAGGTCGATCAAGAGGGGTTCATCGTCACTGCGCCggg > 8:268969/1‑149 (MQ=255) ccTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGc < 3:328668/149‑1 (MQ=255) cTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGc > 4:395915/1‑148 (MQ=255) aGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGGAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTGGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGtt > 4:198310/1‑149 (MQ=255) gtCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGc > 6:320152/1‑149 (MQ=255) cGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGTTg < 6:223778/146‑1 (MQ=255) tGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCgg < 5:198680/132‑1 (MQ=255) tGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCgg > 6:198680/1‑132 (MQ=255) cAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCg > 2:98038/1‑147 (MQ=255) cAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGt < 7:96384/148‑1 (MQ=255) aaGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAgg < 8:142182/108‑1 (MQ=255) aaGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAgg > 7:142182/1‑108 (MQ=255) gTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTagca < 2:229047/149‑1 (MQ=255) gTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTag > 4:300005/1‑147 (MQ=255) gagCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTagcagc < 5:140139/148‑1 (MQ=255) gCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTcc < 5:165189/149‑1 (MQ=255) gTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTgggg > 7:246775/1‑126 (MQ=255) gTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTgggg < 8:246775/126‑1 (MQ=255) cATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCgcag > 4:389331/1‑147 (MQ=255) cATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCgcag > 6:53510/1‑147 (MQ=255) cATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGGCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCgcagca < 5:320152/149‑1 (MQ=255) aTGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCgcagc < 5:250433/147‑1 (MQ=255) aTGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCgcagc > 6:250433/1‑147 (MQ=255) gACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCGCAGCAGGt > 1:179463/1‑149 (MQ=255) gACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCCCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTTCTCCTCAGCAGGt > 6:355711/1‑149 (MQ=255) aCTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCGCAGCAGGTg < 3:147503/149‑1 (MQ=255) ccTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCGCAGCAGGTGCaa > 6:211031/1‑148 (MQ=255) ccTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCGCAGCAGGTGCAac < 1:98038/149‑1 (MQ=255) cTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGacggccgcatcaaggcagtcatgggcaccctgggcgagctctacttgcacgaagacactgcaggcccgtccctgcgcatggagcgtgccgacgccgcgcgc < 7:261515‑M2/149‑102 (MQ=255) gCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGacggccgcatcaaggcagtcatgggcaccctgggcgagctctacttgcacgaagacactgcaggcccgtccctgcgcatggagcgtgccgacgccgcgcgcctgaac < 6:351916‑M2/149‑108 (MQ=255) gCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGACCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCGCAGCAGGTGCAACACGATc < 4:173333/148‑1 (MQ=255) cGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCGCAGCAGGTGCAACACGATCgg < 3:33838/149‑1 (MQ=255) cGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCGCAGCAGGTGCAACACGATCgg < 8:740/149‑1 (MQ=255) cGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTGCATCGTCACTGCGCCGGGCCAGGTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCGCAGCAGGTGCAACACGATCgg < 3:198310/149‑1 (MQ=255) ggCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGacggccgcatcaaggcagtcatgggcaccctgggcgagctctacttgcacgaagacactgcaggcccgtccctgcgcatggagcgtgccgacgccgcgcgcctgaacg < 4:74588‑M2/148‑109 (MQ=255) gCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTGGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCCGCTCCGGGCTGCTGCGCAGCAGGTGCAACACGATCgg > 4:319431/1‑147 (MQ=255) gggcagggcGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACGGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCGCAGCAGGTGCAACACGATCGGCAGCAGGc < 8:169474/149‑1 (MQ=255) gACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCGCAGCAGGTGCAACACGATCGGCAGCAGGCTGTGGCGCt > 6:112614/1‑149 (MQ=255) gACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCGCAGCAGGTGCAACACGATCGGCAGCAGGCTGTGGCGCt > 8:106224/1‑149 (MQ=255) aCGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCGCAGCAGGTGCAACACGATCGGCAGCAGGCTGTGGCGCTg < 6:297435/149‑1 (MQ=255) gcAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCGCAGCAGGTGCAACACGATCGGCAGCAGGCTGTGGCGCTGGCCa > 5:209346/1‑149 (MQ=255) aaGCCGGGGCATCGTGACGGCAGCGGTTGAGGTCGATCAACAGGGGTTCATGGTCAGTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCGCAGCAGGTGCAACACTATCGGCAGCAGGCTGTGGCGCTGGCCATCg < 5:355711/149‑1 (MQ=255) | TTTCGTTCAGGCGCGCGGCGTCGGCACGCTCCATGCGCAGGGACGGGCCTGCAGTGTCTTCGTGCAAGTAGAGCTCGCCCAGGGTGCCCATGACTGCCTTGATGCGGCCGTAGGGCAGGGCGACGCGCAAAGCCGGGGCATCGAGACGGCCGCGGTTGAGGTCGATCAACAGGGGTTCATCGTCACTGCGCCGGGCCAGTTCGCTGGGGCGTAGCAGCTCCGGGCTGCTGCGCAGCAGGTGCAACACGATCGGCAGCAGGCTGTGGCGCTGGCCATCG > NC_002947/2449294‑2449571 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |